Afipia carboxidovorans OM5 (Mississippi): OCAR_7149
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Entry
OCAR_7149 CDS
T00783
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oca03021
]
OCAR_7149 (rpoH)
Transcription machinery [BR:
oca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCAR_7149 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
KORA
HTH_3
HTH_7
GntR
HTH_28
HTH_23
GP3_package
HTH_Crp_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACI94253
UniProt:
B6JIL5
LinkDB
All DBs
Position
3108434..3109333
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AA seq
299 aa
AA seq
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MARTATLPILNGESGLSHYLAEIRKFPMLEPQEEYMLAKRWREHDDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALEDGDMHEDQVKLIAKRLGVTERDVIDMNRRL
GGDASLNAPIRDDGEPGEWQDWLVDTSPNQETIMAESEEYDHRRNALTGAMGVLNPRERR
IFEARRLAEEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQAAVKSTVARQEKAALEAAY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagccactctgccgattctcaacggagaatccggcctttcccattacctc
gccgaaatccgcaaattccccatgcttgaaccgcaggaggaatacatgctcgccaagcgt
tggcgcgagcatgacgaccgggatgcggcgcataagctcgtgaccagccatctgcggctc
gtggcgaagatcgccatgggttaccgcggctacggcctgccgatctccgaggtcgtctcg
gagggcaatgtcggcctgatgcaggcggtcaagcggttcgagcccgaaaagggcttccgc
ctcgccacctatgcgatgtggtggatcaaggcgtcgatccaggaatacatcctgcgttcg
tggtcgctcgtgaagatgggcaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatctccgcgctggaagacggcgacatgcacgaggatcaggtcaag
ctgatcgcgaagcgtctcggcgtgaccgagcgtgacgtgatcgacatgaaccgccgcctc
ggtggcgacgcctcgctcaacgcgccgatccgcgacgacggcgaacccggcgaatggcag
gactggctggtcgatacctcgcccaaccaggaaaccatcatggcggagagcgaggaatac
gatcaccgccgcaacgcgctgaccggcgccatgggcgtgctcaacccgcgcgaacgccgc
atcttcgaggcgcggcggcttgccgaagagccgatgacgctcgaggatctggccgccgag
ttcggtgtctcgcgcgaacgcgtacgccagattgaggtgcgtgccttcgagaaggtacag
gccgcggtgaagagcacggtcgcacgtcaggagaaggccgcgctggaagccgcctactga
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