Afipia carboxidovorans OM5 (Mississippi): OCAR_7217
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Entry
OCAR_7217 CDS
T00783
Name
(GenBank) ribonuclease T2 family
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oca03016
]
OCAR_7217
Enzymes [BR:
oca01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
OCAR_7217
Transfer RNA biogenesis [BR:
oca03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
OCAR_7217
Prokaryotic type
OCAR_7217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
ACI94321
LinkDB
All DBs
Position
complement(3169905..3170591)
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AA seq
228 aa
AA seq
DB search
MNFRRGLASLTAAMGVLLVASFGAAAQDHRQNAPGAFDFYVLSLSWSPSFCEAARERGNT
GRSTQAQCSGRPYSFVVHGLWPQYERGYPEYCKRPSPRLDRNVMRGMLDLMPAPGLVYNE
WDKHGTCSGLGARGYFETVRKARASVKIPEEYLDLASPKTVTPGEVEEAFIKANPGLSAA
AIAVRCDSRRLGEVRICMNKDLQFRACEQVNRSACRRNQIVMPPMRGG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttccgtcgcgggctggcctcgctcacggctgcaatgggcgtgctgcttgtcgcc
agcttcggcgcggcggcgcaggaccatcggcagaatgcgccgggcgcgtttgatttctat
gtgctgtcgctgtcgtggtcgccgtcgttctgcgaggcggcgcgtgagcgcggcaacacc
gggcgcagcacgcaggcccagtgcagcgggcggccttattcgttcgtggtgcacgggctg
tggccgcaatatgagcgcggctatcccgaatattgcaagcggccctcgccgcggctcgat
cgcaacgtcatgcgcggaatgctcgatctgatgcccgcgccggggctcgtctacaacgag
tgggacaagcacggcacctgctcggggcttggtgcgcgcggttatttcgagacggtgcgc
aaggcgcgcgcctcggtgaaaattcccgaggaatatctcgatctggcctcgcccaagacg
gtcacgccgggtgaggtggaggaagctttcatcaaggccaatccgggcctcagcgccgct
gcgatcgccgtgcgctgcgacagccgcaggcttggcgaggtgcggatttgcatgaacaag
gatctgcaattccgcgcttgcgagcaggtcaaccgcagcgcctgccgccgcaatcagatt
gtgatgccgccgatgcgcggcgggtag
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