Afipia carboxidovorans OM5 (Mississippi): OCAR_7241
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Entry
OCAR_7241 CDS
T00783
Name
(GenBank) DNA mismatch repair protein
KO
K03572
DNA mismatch repair protein MutL
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OCAR_7241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oca03400
]
OCAR_7241
DNA repair and recombination proteins [BR:
oca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
OCAR_7241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ACI94345
UniProt:
B6JIV1
LinkDB
All DBs
Position
3194218..3196056
Genome browser
AA seq
612 aa
AA seq
DB search
MPVRQLPEQIVNRIAAGEVVERPASAVKELVENAIDAGGTRIDIFTEGGGRRRIVITDDG
SGMTQGDLALAVERHATSKLDDEDLLRIRTLGFRGEALPSISSVAKLAITTRHAAEPHAW
AVEVDAGAKSAIAPAALQRGTRVEVSDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR
PDIAFTLAGEERAPVTWAAALPGAPGRLTRLGDILGSDFRTHAIEVGSEREGVSVEGFAA
APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPIVALFVTLDPQEVDAN
VHPAKTEVRFRNAGLVRALIVHALKDGLAREGRRTAANTNGAAITTAFRTEGFSREGFAR
ESLPRGGYDWRSSPAAPWPPQAAAQAPAMGFDESAQAAFDAGAPSADTRGNEAPLGDALG
RPLGAARTQIHENYIVAQTNDGLILVDQHAAHERIVYERLKASLTKNGVARQMLLIPEIV
EMDEASVEKLLARASELEKYGLSIESFGPGAVAVRETPALLGKANAASLLRDLAEHMAEW
DEALPLERRLMHVAATMACHGSVRSGRILKVEEMNALLREMEATPNSGQCNHGRPTYVEL
KLADIEKLFGRR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccgccaactgcccgaacagatcgtcaaccgcatcgccgccggcgaggtggtg
gagcggcccgcgagcgcggtgaaggaactcgtcgagaacgcgatcgacgcaggcggcacg
cgcatcgatatcttcaccgaaggcggcggacggcggcgcatcgtcatcaccgacgacggc
agcggcatgacgcagggcgaccttgcgctcgcggtcgagcgccacgccacctcaaagctc
gacgacgaggacctgttgcgcatccgcacgctgggctttcgcggcgaagcgctgccttcg
atcagttcggtggcgaagcttgcgatcaccacgcgccatgcagccgagccgcacgcctgg
gcggtcgaggtcgatgccggtgcgaagtccgcgatcgcacctgccgcgctccagcgcggc
acccgcgtcgaagtcagcgatcttttctacgcgacgcccgcgcggctgaaatttctcaag
accgaccgcaccgaagcggaggcgatccgcgaagtggtgcggcggctcgcgatggcgcgg
cccgacatcgccttcacgcttgcgggcgaggagcgcgcgcccgtcacctgggccgcggcg
ctgcccggcgcgccggggcggctgacgcggctcggcgatattctcggcagcgatttccgc
acccacgcgatcgaagtcggctctgagcgcgaaggcgtcagtgtcgagggctttgccgcc
gcgccgtcactgacgcgcgccaacgcgctcgggcaatatctgttcgtcaacggccgcccg
gtgcgcgacaagctcattctcggtgcggtacgcgccgcctatgccgactatctgccgcgc
gaccgccacccgatcgtggcgctgttcgtcacgctcgacccgcaggaggtcgacgccaac
gtccacccggccaagaccgaagtgcgtttccgcaacgccggcctcgtgcgcgcgctgatc
gtgcatgcgctgaaggacggcctggcgcgcgaaggccgccgcaccgccgccaacaccaat
ggcgcggcgatcaccaccgcgtttcgcactgaaggattctcccgcgaaggctttgcgcgc
gagagtttgccgcgcggcggttacgactggcgctcctcgcccgccgcgccatggccaccg
caggctgcggcgcaagcgcccgcaatgggctttgacgaatccgcacaggccgcgttcgat
gccggcgcgccgagcgccgacacacgcggcaacgaggcgccgctgggcgacgcgctcggc
cgcccgctcggcgcggcgcgaacgcagatccacgagaattatatcgtggcgcagactaac
gacggtctgattcttgtcgatcagcacgccgcgcatgaacgcatcgtctacgagcggctc
aaggcttcgctcacaaagaacggcgtcgcccgccagatgctgctgatccccgagatcgtc
gagatggacgaggcgtcggtcgagaagctgctcgcgcgcgcgagtgaactggaaaaatac
ggcctctcgatcgaatccttcggccccggcgcggttgccgtgcgcgagacgccggcgctg
ctcggcaaggcgaatgcggcctcgctgttgcgtgacctggccgaacacatggcggaatgg
gacgaggcgctgccactggagcgacggttgatgcacgtcgccgccaccatggcctgtcat
ggctcggtgcgctccggccgcatcctcaaggtcgaggaaatgaatgcgctgttgcgcgag
atggaagcgacgccgaattccggccaatgcaaccacggccgcccgacctatgtggaattg
aagctcgccgatatagagaagctgttcggacggcggtag
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