Afipia carboxidovorans OM5 (Mississippi): OCAR_7272
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Entry
OCAR_7272 CDS
T00783
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCAR_7272 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oca03019
]
OCAR_7272 (groL)
03110 Chaperones and folding catalysts [BR:
oca03110
]
OCAR_7272 (groL)
03029 Mitochondrial biogenesis [BR:
oca03029
]
OCAR_7272 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oca04147
]
OCAR_7272 (groL)
Enzymes [BR:
oca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OCAR_7272 (groL)
Messenger RNA biogenesis [BR:
oca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OCAR_7272 (groL)
Chaperones and folding catalysts [BR:
oca03110
]
Heat shock proteins
HSP60 / Chaperonin
OCAR_7272 (groL)
Mitochondrial biogenesis [BR:
oca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OCAR_7272 (groL)
Exosome [BR:
oca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCAR_7272 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OCAR_7272 (groL)
Exosomal proteins of breast cancer cells
OCAR_7272 (groL)
Exosomal proteins of colorectal cancer cells
OCAR_7272 (groL)
Exosomal proteins of bladder cancer cells
OCAR_7272 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
ACI94376
UniProt:
B6JIX0
LinkDB
All DBs
Position
3227086..3228735
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFSGDARERMLRGVDTLANAVKVTLGPKGRNVVINKSFGAPRITKDGVTVAKEIE
LEDKFENMGAQMVREVASKTNDTAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGID
IAVTAVIKDIEKRAKPVAASSEVAQVGTISANGDSTIGKMIAQAMQKVGNEGVITVEEAK
SLDTDVDIVEGMKFDRGYLSPYFVTNAEKMTAELEDAYILLHEKKLSGLQAMLPVLEAVV
QSGKPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGQVI
SDDLGMKLENVTLKQLGRAKKAVIDKENTTIVNGAGKKADIEARVNQIKAQIEETTSDYD
REKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGTALLR
AKKAVGRINNDNSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILDNKTETFGFDA
QNEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKDAAPAMPAGGGMGG
MGGMGGMGF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacgtaaaattctctggcgacgcgcgcgaacggatgctgcgcggcgtcgac
accctcgccaacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtcatcaac
aagagcttcggcgctccccgcatcaccaaggacggcgtcaccgtcgccaaggagatcgag
ctcgaggacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcttccaagacc
aacgacaccgcgggtgacggcaccaccaccgcgaccgtgctcgcccaggcgatcgttcgc
gaaggcgccaaggcggttgccgccggcatgaacccgatggacctcaagcgcggcatcgac
atcgccgtcaccgccgtcatcaaggacatcgagaagcgtgcgaagccggttgcggcatcc
tcggaagtcgcccaggtcggcaccatttccgcgaacggcgacagcaccatcggcaagatg
atcgcgcaggcgatgcagaaagtcggcaacgagggcgtcatcaccgtcgaggaagcgaag
tcgctcgacaccgacgtcgatatcgtcgagggcatgaagttcgaccgcggctatctctcg
ccgtacttcgtcaccaacgccgagaagatgacggccgagctcgaggacgcctacatcctc
ttgcacgagaagaagctctccggtctgcaggccatgctgccggtgctggaagccgtcgtg
cagtccggcaagccgctcctcatcatcgccgaggacatcgagggcgaagcgctcgcgacc
ctcgtcgtcaaccgcctgcgtggcggcctcaaggttgccgccgtcaaggcgccgggcttc
ggcgatcgtcgcaaggcgatgctggaagacatcgcggtgctgaccggcggccaggtgatc
tccgacgatctcggcatgaagctcgagaacgtcacgctgaagcagctcggccgcgccaag
aaggcggtgatcgacaaggagaacaccaccatcgtcaacggcgccggcaagaaggccgac
atcgaggcgcgcgtcaaccagatcaaggcgcagatcgaggaaaccacctcggactacgac
cgtgagaagctgcaggagcgccttgccaagctcgccggcggcgtcgcggtgatccgcgtc
ggcggtgcgaccgagatcgaggtcaaggagaagaaggatcgcgtggaggacgcgctcaac
gccacccgcgccgcggtgcaggaaggcatcgttccgggcggcggcaccgctctccttcgc
gccaagaaggcagtcggccgcatcaacaacgacaactccgacgtgcaggccggcatcaac
atcgtgctgaaggcgctggaagctccgatccgccagatcgccgagaacgccggtgtcgag
ggctcgatcgttgtcggcaagatcctcgacaacaagaccgagaccttcggcttcgacgcc
cagaacgaagagtatgtcgacatggtcgccaagggcatcatcgacccggccaaggtggtt
cgcactgcgctgcaggacgcggcctccgtcgcgggcctcctcgtcaccaccgaggcgatg
gttgccgagctgccgaaggacgccgcaccggcgatgcccgccggcggtggaatgggcggc
atgggtggaatgggcggcatgggcttctga
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