Afipia carboxidovorans OM5 (Mississippi): OCAR_7472
Help
Entry
OCAR_7472 CDS
T00783
Name
(GenBank) ABC branched chain amino acid family transporter
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca02010
ABC transporters
oca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OCAR_7472
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCAR_7472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_7472
Transporters [BR:
oca02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
OCAR_7472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
RsgA_GTPase
AAA_30
SMC_N
AAA_27
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ACI94575
UniProt:
B6JJI1
LinkDB
All DBs
Position
complement(3430214..3432013)
Genome browser
AA seq
599 aa
AA seq
DB search
MTQRLLTPLAFLALAAFLIALPFTADNEYSLRLFMLFAIYAIVALGLNVLVGLAGLISLG
QAGLFALGAYTGAILATRLGWDFIFAAMAGTVVAGAFGALLAYPTVRVRGVYLAVITIAF
GLIVENVIIEWDHLTGGTTGISSIPKPALFGWPLDGFRYYAVLAVLLFLVVVITHNIKQS
RYGRAMLAVSQSETAARGVGLNATGVRTLAFVIASSTAGLAGVLYAYLNLYISPDSFTFN
DSIRFLLMVVLGGAGTTVGALIGALILTYLPEYLQQLQYWQQFAYGLLLALVMFVLPQGI
FGTLSHLVARFFRRAPAPSEMAESEIEKVLKDAKAGWAPASFSAEGLTIRFGGLTALNKA
SMQVAPGEIHALIGPNGAGKSTMVNIITGFYRPNEGTVTLDGVNMAGSPPHAVARSGVAR
TFQNTELFGDLTVLENVMVGFQKRLSYGLFAAAFRTGRFHKEEAECRHAAEALLAFVGLT
GFANEKARFLPFGMQRRLEIARALATAPRLLLLDEPAAGLTTQEIDELDRMIRRTAALGI
SVLLIEHHVDLIMSVADRVTVLDYGVVIASDKPGIIQNDPRVIEAYFGVAPAAQAAEGA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgtcttctcacgccgctcgccttcctcgcgctggcggccttccttatcgcg
ctgccgttcacggcggacaacgagtactcgctgcggctgttcatgctgttcgcgatctac
gcgatcgtggcgctcggcctcaacgtgctcgtcggtctcgctggtctgatctcgctcggc
caggcaggcttgttcgcgctcggcgcctatacgggtgcgattcttgcgacccgtctcggc
tgggatttcatctttgcggcgatggccggcaccgtggttgccggtgcgttcggcgcgctg
ctcgcttatcccacggtgcgggtgcgcggcgtctatctcgccgtcatcaccatcgcgttc
ggcctgatcgtcgaaaacgtcatcatcgagtgggatcatctcaccggcggcaccaccggc
atcagcagcattccgaagccggcgctgttcggctggccgctcgacggtttccgctactac
gccgtgctcgcggtgcttctgtttcttgtcgtggtcatcacccacaacatcaagcagtcg
cgttatggccgcgccatgctggcggtgtcgcagagcgagaccgcggcacgcggtgtcggc
ctcaatgccaccggtgtgcgcacgctcgcctttgtcatcgcctcgtcgacggcgggactt
gccggcgtgctctatgcctacctcaacctctacatctcgcctgacagcttcaccttcaac
gactccatccgcttcctgctgatggttgtgctgggcggcgcaggcaccacggtcggcgca
ctgatcggcgcgctgatcctgacctatctgccggagtacctgcagcagcttcagtactgg
cagcagttcgcctacggcctgttgctggcgctggtgatgttcgtgctgccgcagggcatc
ttcggcacgctctcgcatctcgttgcgcgcttcttccggcgtgcgcccgcaccgtccgag
atggcggagagcgagatcgagaaggtgctgaaggatgccaaggcgggttgggcaccggcg
tctttctcggccgaagggctcaccatccgctttggcggcctcaccgcgctcaacaaggcg
tcgatgcaggttgcgccgggcgagatccatgcgctgatcggcccgaatggtgccggcaag
tcgaccatggtcaacatcatcaccggcttctaccggcccaatgaaggcaccgtcacgctc
gacggcgtcaacatggccggctccccgccgcacgccgtggcgcgcagcggcgtcgcgcgc
accttccagaacaccgaactgttcggcgatctgacggtgctcgagaacgtcatggtcggc
ttccagaagcggctctcctacgggctgttcgcggcggccttccgcaccgggcgcttccac
aaggaagaggccgagtgccgccatgccgccgaggcgctgcttgcctttgtcggcctcacc
ggcttcgccaatgagaaggcacgcttcctgccgttcggtatgcagcgccgtctcgagatc
gcccgtgcgcttgcgaccgcgccgcgcctcctgctgctcgacgaaccggcggccggcctt
acgacgcaggaaatcgacgagctcgatcgcatgatccgtcgcaccgcggcgctcggcatc
tcggtgctgctgatcgagcatcacgtcgatctcatcatgtcggtggccgatcgcgtgacc
gtgctcgactacggcgtcgtcatcgccagcgacaagcctggcatcattcaaaacgatccg
cgcgtgatcgaggcctatttcggcgtcgcgccagcggcccaagcggcggagggagcctga
DBGET
integrated database retrieval system
