Afipia carboxidovorans OM5 (Mississippi): OCAR_7611
Help
Entry
OCAR_7611 CDS
T00783
Name
(GenBank) transcriptional regulator, LysR family
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
SBP_bac_11
PBP_like_2
HTH_Tnp_4
HTH_AsnC-type
HTH_24
HTH_30
HTH_34
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACI94711
LinkDB
All DBs
Position
complement(3566626..3567942)
Genome browser
AA seq
438 aa
AA seq
DB search
MLDFCSPELVANARRDFSAFDAGKSIQKHKITFRGRDFLVSVNPVYENMGEAVVAISVAL
TDVSNARKPETTTNFGAGGFPSSNNEWVGKGIDADERSRLADGDESAKRSETSISQNPRE
QNRISIQESFARGGSPLGSRITLTALIQTLAVAEYLNFRHAANALGVSQSSISERIKALE
DTFGIPLFERHARGVKLTDAGRCFVERVAISVAQLDHAVKTIGMMARGDRGRLRIGVHAL
IPGSFLTEVIGQYHAQYPDVDVEIAEGTASEVVSQLRAGRLDVAFVAGTPEYPDLHSTCI
WTEPLVVALPANHPLVDRNGITWADLAGEAFLVRYGGTGPQVHDHILLRLAGRWLSPSIL
RLAVERGSLLSMIAQGYGVTIAGSAHTLIRPPGVVFLPFLDEPEPVPFSGVWSPHNRSAV
LRNLLDLANQMSRGARTP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctagatttttgctcacctgaactggtcgccaacgctcgtcgcgatttcagcgcgttc
gatgccggtaaaagcattcaaaaacacaagatcacgtttcgcggacgggactttctcgta
tcggtgaatccggtctacgagaatatgggcgaggctgtcgtcgctatatccgtcgccctc
actgacgtctccaatgcccgtaaaccggagacgacgacaaatttcggtgctggtggtttt
ccgtcgtcgaacaacgagtgggtagggaaagggattgatgccgatgagcggtcgaggctc
gcggacggtgatgagtccgccaagcgctctgaaacttcgatctctcaaaatccgcgagaa
cagaatcgaatatcgattcaggaaagtttcgcgcggggtggttcgccgctcgggtcgcgc
atcacgctgacggcgctaattcaaactctagcagtcgccgagtatctgaatttccgccat
gcggcgaatgcactgggcgtcagtcagtcgagcatcagcgagcgcatcaaagctcttgaa
gacacgtttggcatcccgctattcgagcgtcatgctcgcggcgttaagctaaccgatgct
ggacgatgtttcgtcgagcgggtggcgataagcgtcgcgcagctcgaccatgccgtgaaa
acgatcgggatgatggcgcggggcgaccgtggccggttgcgtatcggtgttcatgcgctc
attcccggcagctttctgaccgaggtgatcggccagtatcacgcgcagtatcccgacgtc
gacgtggagatcgccgaagggacggcatccgaggtggtgagccaactgcgcgccggtcgt
ctcgacgtggcgttcgtcgccggcacgccagaatatcccgatttacactcgacatgcatc
tggaccgagccgctggtggtcgcgctgccggccaaccatccgctcgtcgaccgcaatggt
atcacctgggccgatctggcgggtgaagcctttctagtccgctatggcggcacgggaccg
caggtacatgaccatatcctgctgcgtttggctgggcgctggctctctccgtcgatcctt
cgccttgctgtcgagcgcggctcgctgctgtcgatgattgcgcaaggctacggcgtgacg
atcgctgggagcgcgcatacacttattcgacctcccggcgtcgtattcctgccgttcctc
gatgagccggagccggtgccgttctcaggggtctggtcgccgcacaatcgcagtgcggtt
ctaaggaatctgctcgatctcgcaaaccagatgagccgaggtgctcgcaccccatga
DBGET
integrated database retrieval system
