Ovis canadensis (bighorn sheep): 138414385
Help
Entry
138414385 CDS
T11679
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
ocan
Ovis canadensis (bighorn sheep)
Pathway
ocan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138414385 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocan03041
]
138414385 (DDX42)
Enzymes [BR:
ocan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138414385 (DDX42)
Spliceosome [BR:
ocan03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138414385 (DDX42)
Complex B
138414385 (DDX42)
Complex C
U2 SnRNP specific factors
138414385 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
138414385
NCBI-ProteinID:
XP_069397800
LinkDB
All DBs
Position
11:56440897..56476240
Genome browser
AA seq
948 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGAASSASGFGKSAPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSESSDRGSNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQ
KAGSSAAGASGWTSAGSLNSVPTNSAQQGHSSPDSPIASATKGIPGFGSPGNLSSAPVTY
PSAGAPGVNNNTASGSNSREGTGGGNGKRERYTENRGGSRHSHGESGNRHGDSPRHGDGG
RHGDGGRHGEGYRYPESSSRHTDSRRHADGHPHGENRHGGGGGRHGESRGASDGRNGESR
KESFNRESKMDPKVDSPKVDKMDSKTDKTPDGFAVPEPPKRKKSRWDS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaataaaggtggccccggcactaagaggggctttggctttggcggcttcgcc
atcagtgctgggaagaaggaggagccgaagctcccgcagcagtcccatagtgcctttggg
gcagccagctctgcctctggctttggaaagtcggctccaccacagctcccttctttctac
aaaattggttctaaacgggccaacttcgatgaagaaaatgcatattttgaagatgaggaa
gaagattctagcaacgttgatttaccttacattcctgctgagaactcacctacccgccag
caattccattccaagccagtagactctgacagtgatgatgatcccttagaggcattcatg
gctgaagtggaggatcaggcggcgagagacatgaagaggcttgaagaaaaggacaaggaa
agaaaaaacgtaaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcggtacatggcagagaatccaactgctggtgtggttcaagaggaggaggaagataat
ttggaatatgatagtgatggaaatccaattgcaccttccaaaaaaataattgatcctctt
cctcccattgatcattcagagattgactatccaccatttgagaaaaatttttacaatgaa
catgaagagataaccaacctcaccccacagcagctaatagatctccggcataagctcaac
cttcgggtttctggtgctgcacctcctagaccaggaagtagttttgctcattttgggttt
gatgaacaacttatgcaccagattcggaaatctgagtacacgcagcctactccaatacag
tgccagggtgtacctgtggcattaagtggtagagacatgattggtattgccaaaacaggc
agtgggaaaactgctgcctttatctggcccatgttgattcatatcatggaccagaaagaa
ttggaaccaggtgatggaccgattgcagtgattgtgtgccccactagggagctctgccag
cagatccatgcagaatgtaagcggtttgggaaagcatacaatcttcgatcagtggctgtg
tatggaggagggagcatgtgggaacaggccaaggcccttcaggaaggggcagagattgtt
gtctgtacaccaggtcgactgattgatcatgtgaagaagaaagctaccaaccttcagaga
gtctcctaccttgtgtttgatgaagcagatcgaatgtttgacatgggatttgagtaccag
gtgcgatccatagcaagtcatgtccgtcctgacagacagactctcttattcagtgcaact
tttcggaaaaagatcgaaaagctggccagagacatcctgattgaccccattcgtgtggta
cagggagatattggagaggcaaatgaagatgtgactcagattgtggagatcctccattct
ggacctagtaaatggaactggctcacccggcgtctagtggagtttacctcttcagggagt
gtcctcctgtttgttactaagaaagccaatgctgaagagctggccaataaccttaagcag
gagggtcataatcttggcctgctccatggtgacatggatcagagtgaaagaaacaaggtt
atttcagactttaagaaaaaggacatccccgtcctagtggccacagacgttgcagcccgt
ggtctggacatcccttcaattaagactgtcattaactatgatgtggcacgagatattgac
acccatactcataggattggccgcacaggacgagcgggtgagaagggcgtggcatatacc
ttgctgacacccaaggacagcaattttgcaggtgaccttgttcggaacttggaaggagcc
aatcagcatgtttccaaggaactcctagatctggccatgcagaatgcctggtttcggaaa
tcccgcttcaaaggagggaaggggaaaaagctgaacattggtggaggaggcctgggctac
cgggagcggcctggccttggctctgagagctcggaccgaggaagtaacaacaatgtaatg
agcaattatgaggcctacaagccctccacgggagccatgggagaccggctgacggcgatg
aaagcagctttccagtcacagtacaagagccactttgttgctgccagtttaagcaaccag
aaggctggaagctctgcggctggggcaagcggatggactagtgcagggagcttgaattca
gttccaactaactcagcccagcagggccacagcagtcccgacagccccattgccagcgcc
acaaagggtatcccaggctttggcagtcctgggaacctcagcagtgccccggtgacctac
ccttctgccggagctccaggggtcaacaacaacacagcttcagggagtaacagccgagaa
gggactgggggtggcaatgggaaaagagagcgatatactgagaaccggggtggaagtcgt
cacagtcatggagagagtggcaatcggcatggcgatagcccacggcacggagatgggggt
cgccatggagatgggggtcgccacggagagggataccgctacccagagagcagcagccgt
cacactgacagccgccgtcatgctgatggtcatcctcacggagagaacaggcatggaggg
ggcggaggccgacatggggagagccggggtgccagtgatggtcggaacggtgaaagcagg
aaggaaagttttaatcgtgaaagcaagatggaccccaaggtggacagcccgaaggtggac
aagatggacagcaagacagataagactcctgatggttttgctgtccccgagccgcccaag
cgcaagaaaagtcggtgggacagttag
DBGET
integrated database retrieval system
