KEGG   Ovis canadensis (bighorn sheep): 138416096
Entry
138416096         CDS       T11679                                 
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
  KO
K16478  nephrocystin-4
Organism
ocan  Ovis canadensis (bighorn sheep)
Brite
KEGG Orthology (KO) [BR:ocan00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ocan03037]
    138416096 (NPHP4)
Cilium and associated proteins [BR:ocan03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   138416096 (NPHP4)
SSDB
Motif
Pfam: NPHP4_C2_3rd Ig_NPHP4_1st NPHP4_C2_2nd Ig_NPHP4_4th Ig_NPHP4_2nd Ig_NPH4_3rd NPHP4_SK
Other DBs
NCBI-GeneID: 138416096
NCBI-ProteinID: XP_069400934
LinkDB
Position
12:57907466..58055351
AA seq 1431 aa
MHDWHRIFDQNLLVPPHPQRTRQPLKESTAFQCVLKWLDGPLIKQGVLELLSEVGCHLRV
SLFDVTYRYFFGRTWKSSSRPAEPLSGQPARITFNEPLYFHTSLNHPHVVAVVEVVVEGR
RRDGTLQTLSCGFGILRIFSHKSESPTSTLQDKRLRLYHGSPRALLHPLLQDPVEQNKHM
TLIENCSLQYTLRPHPLLEPVFHLLPENLLVSGLQQIPGLLPAHGESGDALRKPRLQKPV
TCYLDDLFFTLYPSLEKFEEELLELVISDCFREAGSPLDVGTLEILERRLCVGVHNGLGF
VQRPQVLVLVPELEVALTRSASFSRKVGSSSKASSGNQALVLRSRLRLPEMVRHPAFAIV
FQLEYVFNNPSGADGNAASLTSLSSLACMHMVRWAVWNPSLEAGSGRVMLPLQGGIQSNP
SHCLVYKVPPASMSSEEVKQVESGTVQFQYLLSPEEHPDIPTGSASGPKAERRSFRKPPT
SPSSPPASPSQGLTAPQDSPVGPGLSLSQLAASPPSPALRHHSAKPSSQPPGSPVPSLVP
GEFPLEGRISHLEADLSQTALALGTSAADHLQELPFTPVHAPIIAGTQTRSSGGKLSRAS
LALLQSAGFPEILDANKQPAEAVSPTDPVKFSPQKEESDCLQGNEIVLQFLAFSRVPQDE
QAAPWPQTVYFTFQFYRFPPETTPRLQLVELADAGRTSSASLSHILAQIQKDGSFDAGSP
GFQRKYLVDPGFLRPGEQRWFTRYLAMQTLQIDVWDGDSLLLVGSAAVQLKHLLRQGRPA
VQVSHELEVVATEYEQDAMVVSGDMTRFGCVKPINIHTVVKGQLHLTLANVGHLCEQRVR
SPSSLPPSRSRVISNDGVSNFMGGSLLTPGGPRSVKNVVQAQKLADVDSELAALLFTPPR
PGARGPQGIGQEGDAVRRRKLERMRAVRLQECGSEPGRHGRGALAQQSLHAQHARDLQVI
AAYRERTKAESIASALSTAITTQHTIHATLGAAEFFEFALRNPHNAQHTVTIEIDNPELS
LILDGQEWRYFKDVADLHTPLEEDMFHLRGSLPPQLFLRPRETAHIPFKFQTFSVGPWAS
AQASAELRSEKDMDAGSPCKSSTMPTKHAKVLFRAGSGKPLAVLCLTAELQPHVVDQVFR
FYHPELTFLKKAIRLPPWHMLPGAPVGTTSEDPPLHVRCSDPNIICETQNVGPGEPRDVF
LKVASGPSPEVKDFFVTIYVDRWLATPVQTWQVHLHSLQRVDVSCIAGQRTRLALVLRGT
QTVRRVQAFSSHPQELTTDPRGVFVLPPHGVQDLHVSVRARRPGSRFTHLHLVDVDAHQL
VASWLLCLSCRPPLISKAFEIKLPAGGGRGANKRITYTNPYPSRRAYRLHSDHPHLLQFK
EDAFQVGGGETYTIGLRFASRQRAGEEEILIYINDHEDKNEETFCVKVIYQ
NT seq 4296 nt   +upstreamnt  +downstreamnt
atgcacgactggcacaggatctttgaccaaaacctgctggtccctccgcacccacagaga
acacgccagcctctgaaggaatcgacagcgtttcagtgtgtcctgaagtggctcgatggc
ccgctaattaagcagggggtgctggagctgctgtcagaggtgggctgccacctgcgcgtg
tctctcttcgatgtcacctatcggtacttcttcgggaggacgtggaagagctcgtcgagg
cctgcagagccgctcagcgggcagccagccaggatcaccttcaatgagcccttgtatttt
cacacatccttgaaccaccctcatgttgtggccgtggtggaggtggtcgttgaaggcagg
agacgagatgggaccctccagactctgtcctgtgggtttggaattcttcggatcttcagc
cacaagtcggaatctccaacttccactttgcaggacaaacggctgagactgtatcatggg
agcccgcgagccctcctccacccgctccttcaggaccccgtagaacagaacaagcacatg
accctcattgagaactgcagcctgcagtacacactgaggccacacccgctcctggaaccc
gtgttccaccttcttcctgagaacctgctggtgtccggtctgcagcagatacctggcctc
cttccagctcacggagaatcaggagatgccctccggaagccccgcctgcagaagcctgtg
acgtgctacctggatgatctgttcttcacgctgtatccctcgctggagaagtttgaggaa
gagcttctggaactcgttatcagcgattgcttccgggaggctggcagcccgctggatgtc
ggcaccctggagatcctggagcggcgtctgtgtgtgggcgtgcacaatgggttgggcttt
gtgcagcggccacaggtccttgtgctggtgcccgagctggaggtggccttgacacgctct
gccagcttcagccggaaggttggctcctcttccaaggccagctctggaaaccaggctctg
gtcctgagaagccggctccgactccctgagatggtccgtcaccctgcgttcgccattgtc
ttccagctggagtacgtgtttaacaacccctcgggggcggatggcaacgcagcttcactc
acctccttgtccagcctggcatgtatgcacatggttcgctgggctgtctggaacccctcg
ctggaagccggctccgggcgggtgatgttacctctccagggtggcatccagtccaaccct
tcgcactgtctggtctataaggtacccccagccagcatgagctccgaagaggtgaagcag
gtggagtcagggacggtccagttccagtacttgctgagccctgaagaacacccagacata
cccacagggagtgcaagcggccccaaggcagagcggcggtcttttaggaagccacccacg
tccccttcaagcccaccagcatcaccatcccaggggctcaccgctccccaggactcaccc
gtgggaccagggctgtcgctttcccagctggcggcttccccaccatccccggctctgcgc
caccactcggccaaaccctcatcacagccacctgggagccctgtgccctctctggtccca
ggggagttccccttggagggcaggatctctcacctggaggctgacctgagccagacagcc
ttagccctgggaacgtccgctgctgaccacttgcaggaactgcctttcacacccgtgcat
gccccgatcattgcaggaacccagaccaggagctctggagggaagctgtcacgggcctct
ctggcactgctgcagtctgctggctttcccgagattctggacgccaacaagcaaccagct
gaagctgtgagccctacagaccccgtgaagttcagccctcagaaggaagaatcggactgt
ctacaaggcaatgagatagtgctgcagtttcttgcctttagcagggtgcctcaggatgag
caggcagcaccatggcctcagactgtgtacttcacgttccagttctaccgcttcccgccc
gagaccacaccacggctgcagctcgtggagctggccgatgcggggaggaccagctctgcc
tccctgtcgcacatcctcgcccagatccagaaggatggctcctttgatgctggctctccg
ggctttcagcggaagtacctggtggaccccgggttcctgagacccggggagcagcgctgg
ttcacccgctacctggccatgcagaccctgcagatcgatgtctgggatggggactccctg
cttcttgttggatctgctgccgttcagttgaagcacctcctccgccaggggcggccggcc
gtgcaggtctctcacgagctggaggttgtggcaactgaatacgagcaggacgccatggtg
gtgagtggagacatgaccagatttggctgcgtcaaacccatcaacatccacacagtggtg
aagggccagctgcacttgaccttggccaacgtgggtcacttgtgtgaacagagagtgagg
agtcccagttccctgccaccttccaggtcgagggtcatctcaaatgatggagtcagcaac
ttcatgggaggcagcctcctgacacctgggggccccagatcagtgaaaaatgtggtccaa
gcccagaagctggccgatgtggacagcgaactggccgccctgctcttcacacccccgaga
ccgggggcccgggggccccagggcatcggtcaagagggggatgctgtccgcaggcgcaag
ctggagcgcatgagggctgtgcgactgcaggagtgtggatcggagccgggccgccacggg
cggggtgcgctggcccagcagagcctccatgcccagcacgcccgagacctgcaggtcatt
gctgcctaccgtgagcgcacgaaggcagagagcattgccagcgcgctgagcacggccata
accacgcagcacaccatccacgccacgctgggcgctgccgagttcttcgaattcgccctg
aggaacccccacaacgcgcagcacacggtgaccatcgagatagacaaccccgagctcagt
ctcatcctggatggtcaggagtggcggtacttcaaggacgtggctgacttgcacacgccg
ctggaggaggacatgttccacctgcggggcagcctgcccccccaactcttcctgagacct
cgggagactgcccacatccccttcaagttccagactttctctgtgggcccatgggcctcg
gcacaggcctctgctgagctgagatcagagaaggacatggatgctggatcaccctgtaag
tccagcacgatgcccaccaaacatgccaaggtcctgttccgtgcgggcagcggcaagccc
ctggcggtgctctgcctgacggcggagctgcagccccacgtggtggaccaggtcttccgc
ttttatcacccagagctcaccttcctgaagaaggccatccgcctgccgccctggcacatg
cttccaggtgcccctgtagggacgaccagtgaggaccctcctctccacgttcgatgtagt
gacccgaacatcatttgtgagacacagaatgtgggccccggggagccccgtgacgtgttc
ctgaaggtggccagtggccctagcccagaggtcaaggacttctttgtcaccatctacgta
gaccgctggttggcaacgcctgtccagacctggcaggtccacctgcactcgctgcagcga
gtggatgtctcctgtatcgccggccagaggacccgcctggctctcgtcctccgggggacg
cagacagtgaggagggtgcaggctttcagctcacacccccaggagctgacgacggacccc
agaggtgtgtttgtgctgccccctcatggggttcaggacttgcatgtgagcgtcagggcc
cgcaggccgggcagccgcttcacgcacctccacctggtcgacgtggacgctcaccagcta
gtggcctcatggctcctgtgtctctcctgccggccgcctctcatctccaaggccttcgag
atcaagctgcccgcggggggcgggaggggcgccaacaagcgcatcacctacaccaacccc
tacccctcgcggagggcctaccgcctgcacagtgaccacccccacctgctgcagttcaag
gaggatgccttccaggtcgggggaggcgagacctataccatcggcctgcggtttgcgtcc
cgtcagagagctggggaggaggagatcctgatttacatcaacgaccatgaagacaaaaac
gaggagaccttttgcgtgaaggtcatctaccagtag

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