Ovis canadensis (bighorn sheep): 138416096
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Entry
138416096 CDS
T11679
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
ocan Ovis canadensis (bighorn sheep)
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocan03037
]
138416096 (NPHP4)
Cilium and associated proteins [BR:
ocan03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
138416096 (NPHP4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
Ig_NPHP4_1st
NPHP4_C2_2nd
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
138416096
NCBI-ProteinID:
XP_069400934
LinkDB
All DBs
Position
12:57907466..58055351
Genome browser
AA seq
1431 aa
AA seq
DB search
MHDWHRIFDQNLLVPPHPQRTRQPLKESTAFQCVLKWLDGPLIKQGVLELLSEVGCHLRV
SLFDVTYRYFFGRTWKSSSRPAEPLSGQPARITFNEPLYFHTSLNHPHVVAVVEVVVEGR
RRDGTLQTLSCGFGILRIFSHKSESPTSTLQDKRLRLYHGSPRALLHPLLQDPVEQNKHM
TLIENCSLQYTLRPHPLLEPVFHLLPENLLVSGLQQIPGLLPAHGESGDALRKPRLQKPV
TCYLDDLFFTLYPSLEKFEEELLELVISDCFREAGSPLDVGTLEILERRLCVGVHNGLGF
VQRPQVLVLVPELEVALTRSASFSRKVGSSSKASSGNQALVLRSRLRLPEMVRHPAFAIV
FQLEYVFNNPSGADGNAASLTSLSSLACMHMVRWAVWNPSLEAGSGRVMLPLQGGIQSNP
SHCLVYKVPPASMSSEEVKQVESGTVQFQYLLSPEEHPDIPTGSASGPKAERRSFRKPPT
SPSSPPASPSQGLTAPQDSPVGPGLSLSQLAASPPSPALRHHSAKPSSQPPGSPVPSLVP
GEFPLEGRISHLEADLSQTALALGTSAADHLQELPFTPVHAPIIAGTQTRSSGGKLSRAS
LALLQSAGFPEILDANKQPAEAVSPTDPVKFSPQKEESDCLQGNEIVLQFLAFSRVPQDE
QAAPWPQTVYFTFQFYRFPPETTPRLQLVELADAGRTSSASLSHILAQIQKDGSFDAGSP
GFQRKYLVDPGFLRPGEQRWFTRYLAMQTLQIDVWDGDSLLLVGSAAVQLKHLLRQGRPA
VQVSHELEVVATEYEQDAMVVSGDMTRFGCVKPINIHTVVKGQLHLTLANVGHLCEQRVR
SPSSLPPSRSRVISNDGVSNFMGGSLLTPGGPRSVKNVVQAQKLADVDSELAALLFTPPR
PGARGPQGIGQEGDAVRRRKLERMRAVRLQECGSEPGRHGRGALAQQSLHAQHARDLQVI
AAYRERTKAESIASALSTAITTQHTIHATLGAAEFFEFALRNPHNAQHTVTIEIDNPELS
LILDGQEWRYFKDVADLHTPLEEDMFHLRGSLPPQLFLRPRETAHIPFKFQTFSVGPWAS
AQASAELRSEKDMDAGSPCKSSTMPTKHAKVLFRAGSGKPLAVLCLTAELQPHVVDQVFR
FYHPELTFLKKAIRLPPWHMLPGAPVGTTSEDPPLHVRCSDPNIICETQNVGPGEPRDVF
LKVASGPSPEVKDFFVTIYVDRWLATPVQTWQVHLHSLQRVDVSCIAGQRTRLALVLRGT
QTVRRVQAFSSHPQELTTDPRGVFVLPPHGVQDLHVSVRARRPGSRFTHLHLVDVDAHQL
VASWLLCLSCRPPLISKAFEIKLPAGGGRGANKRITYTNPYPSRRAYRLHSDHPHLLQFK
EDAFQVGGGETYTIGLRFASRQRAGEEEILIYINDHEDKNEETFCVKVIYQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgcacgactggcacaggatctttgaccaaaacctgctggtccctccgcacccacagaga
acacgccagcctctgaaggaatcgacagcgtttcagtgtgtcctgaagtggctcgatggc
ccgctaattaagcagggggtgctggagctgctgtcagaggtgggctgccacctgcgcgtg
tctctcttcgatgtcacctatcggtacttcttcgggaggacgtggaagagctcgtcgagg
cctgcagagccgctcagcgggcagccagccaggatcaccttcaatgagcccttgtatttt
cacacatccttgaaccaccctcatgttgtggccgtggtggaggtggtcgttgaaggcagg
agacgagatgggaccctccagactctgtcctgtgggtttggaattcttcggatcttcagc
cacaagtcggaatctccaacttccactttgcaggacaaacggctgagactgtatcatggg
agcccgcgagccctcctccacccgctccttcaggaccccgtagaacagaacaagcacatg
accctcattgagaactgcagcctgcagtacacactgaggccacacccgctcctggaaccc
gtgttccaccttcttcctgagaacctgctggtgtccggtctgcagcagatacctggcctc
cttccagctcacggagaatcaggagatgccctccggaagccccgcctgcagaagcctgtg
acgtgctacctggatgatctgttcttcacgctgtatccctcgctggagaagtttgaggaa
gagcttctggaactcgttatcagcgattgcttccgggaggctggcagcccgctggatgtc
ggcaccctggagatcctggagcggcgtctgtgtgtgggcgtgcacaatgggttgggcttt
gtgcagcggccacaggtccttgtgctggtgcccgagctggaggtggccttgacacgctct
gccagcttcagccggaaggttggctcctcttccaaggccagctctggaaaccaggctctg
gtcctgagaagccggctccgactccctgagatggtccgtcaccctgcgttcgccattgtc
ttccagctggagtacgtgtttaacaacccctcgggggcggatggcaacgcagcttcactc
acctccttgtccagcctggcatgtatgcacatggttcgctgggctgtctggaacccctcg
ctggaagccggctccgggcgggtgatgttacctctccagggtggcatccagtccaaccct
tcgcactgtctggtctataaggtacccccagccagcatgagctccgaagaggtgaagcag
gtggagtcagggacggtccagttccagtacttgctgagccctgaagaacacccagacata
cccacagggagtgcaagcggccccaaggcagagcggcggtcttttaggaagccacccacg
tccccttcaagcccaccagcatcaccatcccaggggctcaccgctccccaggactcaccc
gtgggaccagggctgtcgctttcccagctggcggcttccccaccatccccggctctgcgc
caccactcggccaaaccctcatcacagccacctgggagccctgtgccctctctggtccca
ggggagttccccttggagggcaggatctctcacctggaggctgacctgagccagacagcc
ttagccctgggaacgtccgctgctgaccacttgcaggaactgcctttcacacccgtgcat
gccccgatcattgcaggaacccagaccaggagctctggagggaagctgtcacgggcctct
ctggcactgctgcagtctgctggctttcccgagattctggacgccaacaagcaaccagct
gaagctgtgagccctacagaccccgtgaagttcagccctcagaaggaagaatcggactgt
ctacaaggcaatgagatagtgctgcagtttcttgcctttagcagggtgcctcaggatgag
caggcagcaccatggcctcagactgtgtacttcacgttccagttctaccgcttcccgccc
gagaccacaccacggctgcagctcgtggagctggccgatgcggggaggaccagctctgcc
tccctgtcgcacatcctcgcccagatccagaaggatggctcctttgatgctggctctccg
ggctttcagcggaagtacctggtggaccccgggttcctgagacccggggagcagcgctgg
ttcacccgctacctggccatgcagaccctgcagatcgatgtctgggatggggactccctg
cttcttgttggatctgctgccgttcagttgaagcacctcctccgccaggggcggccggcc
gtgcaggtctctcacgagctggaggttgtggcaactgaatacgagcaggacgccatggtg
gtgagtggagacatgaccagatttggctgcgtcaaacccatcaacatccacacagtggtg
aagggccagctgcacttgaccttggccaacgtgggtcacttgtgtgaacagagagtgagg
agtcccagttccctgccaccttccaggtcgagggtcatctcaaatgatggagtcagcaac
ttcatgggaggcagcctcctgacacctgggggccccagatcagtgaaaaatgtggtccaa
gcccagaagctggccgatgtggacagcgaactggccgccctgctcttcacacccccgaga
ccgggggcccgggggccccagggcatcggtcaagagggggatgctgtccgcaggcgcaag
ctggagcgcatgagggctgtgcgactgcaggagtgtggatcggagccgggccgccacggg
cggggtgcgctggcccagcagagcctccatgcccagcacgcccgagacctgcaggtcatt
gctgcctaccgtgagcgcacgaaggcagagagcattgccagcgcgctgagcacggccata
accacgcagcacaccatccacgccacgctgggcgctgccgagttcttcgaattcgccctg
aggaacccccacaacgcgcagcacacggtgaccatcgagatagacaaccccgagctcagt
ctcatcctggatggtcaggagtggcggtacttcaaggacgtggctgacttgcacacgccg
ctggaggaggacatgttccacctgcggggcagcctgcccccccaactcttcctgagacct
cgggagactgcccacatccccttcaagttccagactttctctgtgggcccatgggcctcg
gcacaggcctctgctgagctgagatcagagaaggacatggatgctggatcaccctgtaag
tccagcacgatgcccaccaaacatgccaaggtcctgttccgtgcgggcagcggcaagccc
ctggcggtgctctgcctgacggcggagctgcagccccacgtggtggaccaggtcttccgc
ttttatcacccagagctcaccttcctgaagaaggccatccgcctgccgccctggcacatg
cttccaggtgcccctgtagggacgaccagtgaggaccctcctctccacgttcgatgtagt
gacccgaacatcatttgtgagacacagaatgtgggccccggggagccccgtgacgtgttc
ctgaaggtggccagtggccctagcccagaggtcaaggacttctttgtcaccatctacgta
gaccgctggttggcaacgcctgtccagacctggcaggtccacctgcactcgctgcagcga
gtggatgtctcctgtatcgccggccagaggacccgcctggctctcgtcctccgggggacg
cagacagtgaggagggtgcaggctttcagctcacacccccaggagctgacgacggacccc
agaggtgtgtttgtgctgccccctcatggggttcaggacttgcatgtgagcgtcagggcc
cgcaggccgggcagccgcttcacgcacctccacctggtcgacgtggacgctcaccagcta
gtggcctcatggctcctgtgtctctcctgccggccgcctctcatctccaaggccttcgag
atcaagctgcccgcggggggcgggaggggcgccaacaagcgcatcacctacaccaacccc
tacccctcgcggagggcctaccgcctgcacagtgaccacccccacctgctgcagttcaag
gaggatgccttccaggtcgggggaggcgagacctataccatcggcctgcggtttgcgtcc
cgtcagagagctggggaggaggagatcctgatttacatcaacgaccatgaagacaaaaac
gaggagaccttttgcgtgaaggtcatctaccagtag
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integrated database retrieval system