Ovis canadensis (bighorn sheep): 138416503
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Entry
138416503 CDS
T11679
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ocan Ovis canadensis (bighorn sheep)
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocan04515
]
138416503 (CLSTN1)
Cell adhesion molecules [BR:
ocan04515
]
Cadherins
Cadherin related
138416503 (CLSTN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
FAM176
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
Cadherin_C_2
V_ATPase_I
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
138416503
NCBI-ProteinID:
XP_069401862
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All DBs
Position
12:54219914..54296687
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AA seq
980 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLCSGGGWASRVNKHKPWLEPTYHGLVTESDSTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCEL
QKDYTFTIQAYDCGKGPDGASVKRSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGRQYD
SILRVEAVDADCSPQFSQICSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCTPGWQGWNSRVEYEPGTGALTLFPNVHLETCDESVASVQ
VVVELETSHIGKGCDRDTYSEKSLHRLCGAASGTAELLPSPGGSWNWTVGLPTDNGHDSD
QVFEFNGTQAVRVPDGIISVNPKGPFTISVWMRHGPFGKKKETILCSSDKTEMNRHHYSL
YVHGCRLVFLLRQDPSEEKKYKPAEFHWKLSQVCDEEWHHYVLNVEIPSVTLYVDGVPHE
PFSVTEDYPLHPSKIETQLMVGACWQEYSGVESDNETEPVPLASAGGDLRMTQFFRGNLA
GLTIRSGKLTDKKVIDCLYTCKEGLDLHTPEGNGRGVKIQANPSQSMLTLEGEDVGELDK
AMQHISYLNSRQFPTPGIRRLKITSIVKCFSEAACISIPPVDGYVMVLQPEEPKISLSGV
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNGEQESLEVDAARLQQKGIEMSSSDVGVVFTGVDTMASYEEILHLLRYRNW
HTRSLLDRKFKLVCSELNGRYVSNEFQVEVNVIHTANPMEHASHIAAQPQFVHPEHRSFI
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHG
DPQTANRQQQLEWDDSTLSY
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggccccggccgcctggctgctgctggccgggctg
ctctgcagcggcgggggctgggcctcgcgagtcaacaagcacaagccgtggctggagccc
acatatcatggcttagttacggagagcgacagcaccgtgctcctcgacccccctctcatc
gccctggacaaagacgctcctttgcgcttcgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaagattcacggacagaatgtgccctttgacgcagtggtg
gtggataaatccactggcgagggggtcattcgctccacagagaagctggactgtgagctg
cagaaggactacacgttcaccatccaggcctatgactgtgggaaggggccagacggggcc
agtgtaaaaagatctcacaaagcaactgtccacattcaggtgaatgacgtcaacgaatat
gcgcccgtgttcaaggagaagtcctacaaagccacagtggtggaggggaggcagtacgac
agcatcttgagggtggaggcggtggacgcagactgctccccccagttcagccaaatctgc
agctatgagatcgtcacccctgatgtgccattcactgtcgacaaagatggttacataaaa
aacacagagaagctgaactatggtaaagagcaccagtacaagctgactgtcacggcctat
gactgcgggaagaaaagagcggcagaagacgttttggtgaagatcagcatcaagcccacc
tgcacccctgggtggcaagggtggaacagcagggtcgaatatgagcctggcaccggcgct
ctgacactctttccgaatgtccacctggaaacgtgtgacgagtcggtggcctcggtgcag
gtagtggtggagctggagaccagccacatcgggaagggctgtgaccgtgacacctactcc
gagaaatcacttcaccggctctgcggtgctgcgtctggcacggctgagctgctgccttcc
ccaggaggctcctggaactggaccgtcggccttcccacggacaacggccacgacagcgac
caggtcttcgagttcaacggcactcaggcggtgagggtcccggatggcatcatctccgtc
aaccccaaggggccctttacgatctctgtgtggatgaggcacgggccatttggcaagaag
aaggagacgattctttgcagctcagacaaaacagagatgaaccgacaccattactcactc
tatgtccacggctgccggctggttttcctcctccgtcaggatccttcagaagagaagaaa
tacaaacctgcagagttccactggaagctgagtcaggtctgtgacgaggaatggcatcac
tatgtcctcaacgtggaaattcccagtgtgaccctctacgtggacggtgtccctcatgag
cccttctctgtcactgaagattacccacttcatccatccaagatcgaaacccagctcatg
gttggggcttgctggcaagagtattcaggagttgaaagtgacaatgaaactgagcctgtg
cctctggcctccgcaggtggtgacttgcgcatgacccagtttttccgaggtaatctggct
ggcctcaccatccgttctgggaagctcacagataagaaggtgattgactgtctgtatacc
tgcaaagaggggctagacctgcacacccccgaaggcaatggcagaggtgtcaagatccag
gccaaccctagtcagtcgatgttgaccttggagggagaggacgtgggggagcttgataag
gccatgcaacacatttcctaccttaattcacgacagttccccaccccagggatccgaaga
ctcaaaatcaccagcatagtcaagtgttttagcgaggccgcctgcatctccatccccccg
gtggatggctacgtgatggttttgcagccagaagagcccaaaatcagtctgagcggcgtc
caccattttgctcgagcggcttctgaatttgaaagctcagagggggttttcctcttccct
gagcttcggatcatcagcaccatcacgagagaagtggagcccgaaggggaaggggatgag
gacccaacagttcaagagtcactggtgtcggaggagatcgtgcacgacctggacacctgt
gaggtcacagtggagggagaagaactgaatggagagcaggagagcctggaggtggacgcg
gcccgcctgcagcagaagggcatcgaaatgagcagctctgacgtgggcgtggtcttcaca
ggtgttgacaccatggccagctacgaggagatcttacacctcctgcgctatcggaactgg
cacaccaggtccttgcttgaccgcaagttcaagcttgtctgctctgagctgaatggtcgc
tatgtcagcaatgagttccaggtggaggtgaatgtcatccacacggccaaccccatggag
cacgccagccacatagccgcccagccgcagttcgtccatcccgagcaccgctccttcatt
gacctctctggtcacaacctggccaacccccacccgtttgcagtcgttcccagcactgcc
accgtcgtcattgtggtgtgcgtcagcttcctggttttcatgatcatcctgggggtgttc
cggatccgggctgcacaccagaggaccatgcgggaccaggacaccgggaaagaaaacgag
atggactgggacgactctgccctgaccatcaccgtgaaccccatggagacatacgaggac
cagcatagcagtgaggaggaagaggaggaggaggaagaggagagcgaggatggggacgag
gaggacgacatcaccagtgccgagtcggagagcagtgaggaggacgagggggagcacggg
gacccgcagactgcgaaccggcagcagcagctggagtgggacgactccaccctcagctac
tga
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