Ovis canadensis (bighorn sheep): 138418561
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Entry
138418561 CDS
T11679
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ocan Ovis canadensis (bighorn sheep)
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocan03000
]
138418561 (CTCF)
03036 Chromosome and associated proteins [BR:
ocan03036
]
138418561 (CTCF)
Transcription factors [BR:
ocan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138418561 (CTCF)
Chromosome and associated proteins [BR:
ocan03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138418561 (CTCF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
zf-C2H2_CASZ1
zf-WIZ
DUF8106
HMBD
Zn_ribbon_DUF2089
DUF7410
Motif
Other DBs
NCBI-GeneID:
138418561
NCBI-ProteinID:
XP_069406058
LinkDB
All DBs
Position
14:48318653..48361187
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPVICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaggaagaggacgcttgccacctt
ccccagaaccagactgatggtggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtgatgatggaacagctggatcctacccttcttcagatgaagactgaagtcatggagggt
gcagttgctccagaagcggaggctgccgtggacgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctatcaacataggagagcttcagcttgtacaagtacctgtt
cctgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacctgtgatatgtcacaccttacctttg
cctgaagggtttcaagtggtaaaagtgggggccaatggagaggtggagaccctagagcaa
ggggaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtgtatgattttgaggaagagcagcaggagggtctgctgtcagaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttatacatgtccacggcgttcaaat
ttggatcggcatatgaaaagtcacactgatgagagaccacataagtgccatctctgtggc
agggcattcagaacagtcacccttctgaggaatcaccttaatacacacacaggtactcgt
cctcacaagtgcccagactgtgatatggcctttgtgactagtggagaattggtgcggcat
cgtcgttacaaacacacccatgagaagccatttaagtgttccatgtgcgattatgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcacactggggagcgtcctttccag
tgcagcttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgcgaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattctacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccggaaaagtgatctgggtgtccacttgcgaaagcagcat
tcctacattgagcagggcaagaaatgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacacaagaacgagaagcgctttaagtgtgatcagtgt
gattacgcttgtagacaggagcggcacatgatcatgcacaagcgcacccacactggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgaccccaactttgtccctgcggcctttgtctgttctaagtgt
gggaaaacatttacacgccggaatactatggcaagacatgcggataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaagaaagaga
aagatgcgttctaaaaaggaggactcctctgacagtgaaaatgctgagccagacttggat
gacaatgaggatgaggaggagcctgccgtggagattgaacccgagccagagccccagcca
gtgaccccagccccaccacctgccaagaaacggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcattcaggtcgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagatgcagagcctgcggagggggag
gaagaggaggcccagccagctgccacagatgcccccaacggagacctcacgcctgagatg
atcctcagcatgatggaccggtga
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integrated database retrieval system
