KEGG   Ovis canadensis (bighorn sheep): 138424271
Entry
138424271         CDS       T11679                                 
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
  KO
K16682  LIM domain-containing protein
Organism
ocan  Ovis canadensis (bighorn sheep)
Pathway
ocan04390  Hippo signaling pathway
ocan04392  Hippo signaling pathway - multiple species
ocan04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:ocan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    138424271 (LIMD1)
   04392 Hippo signaling pathway - multiple species
    138424271 (LIMD1)
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    138424271 (LIMD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocan03019]
    138424271 (LIMD1)
   03036 Chromosome and associated proteins [BR:ocan03036]
    138424271 (LIMD1)
Messenger RNA biogenesis [BR:ocan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     138424271 (LIMD1)
Chromosome and associated proteins [BR:ocan03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     138424271 (LIMD1)
SSDB
Motif
Pfam: LIM zf-ChsH2
Other DBs
NCBI-GeneID: 138424271
NCBI-ProteinID: XP_069416988
LinkDB
Position
19:complement(68214668..68287927)
AA seq 671 aa
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQ
QLLQEETLPRASRGPVNGGGRLGPLAHREAGGGSKLAADGAAKPPLAASTVAPGTTTTVA
PGQLSYPPQEQKAKLYVRGSRQVSQDCGSKESMVNSEMSAFHRPGPCEDPSCLTHGDYYD
NLSLAGPKWADDPGVSPGIRLGVGSGWSGTPGSDPLLSKPSRDPHLYHQQLSAGSGRSLQ
SGLDGGLGGGNSEKPVGVWTTASSQRVSPGLPSPGPENGALPRSAQPRTPSFSAPLALNR
PSQESLPRTNSVVGSEVSGTMPKPTVDPQPWFQDGPKSYLSSSAPSSSPAGMDHMQTGAV
PGLGPKPGCTDPGVISKLSPNSLAHPVMSTLPELPSKEGASGWASDGSLGPVLPETPSSP
RVRLPCQTLIPGPELGPTAAELKLEALTQRLERELDAHPKADYFGACVKCSKGVFGAGQA
CQAMGNLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIM
DMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPIL
PPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKG
PSPTALRQHHF
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggataagtacgatgacttgggcctggaggccagtaagttcattgaggacctgaacatg
tacgaggcctccaaagatggactcttccgagtggacaagggtgcaggcaacaacccggag
tttgaggaaacacgcagggtgtttgctaccaagatggccaaaatccacctgcagcagcag
cagctcctacaggaggagaccctgcccagggcgagccggggtcccgttaatggtggggga
cgcctgggcccactggcccaccgggaagctggtgggggcagcaagctggccgcggacggt
gccgccaagccccctctcgctgcctcaaccgtggcccctgggacgaccaccaccgtggcg
cctgggcagctctcgtacccaccccaggagcagaaggccaagctgtacgtccggggttcg
aggcaagtcagccaagactgtgggtccaaggagagcatggtgaattctgagatgtctgct
ttccatcggccgggcccctgtgaggatccctcctgcctcacccacggagactattacgac
aacctgtccttggcaggccccaagtgggctgacgacccgggcgtgtcccctggcatcagg
ctgggtgtagggagtgggtggtctgggaccccagggagcgaccctctgctgtctaagccc
tccagggatcctcacctgtaccaccagcagctctccgcaggctccggcaggtctttgcag
agtggcctggatggtgggcttggaggaggcaacagcgagaagccagtgggggtctggacc
accgcctcctcccagcgagtgagccctggcctcccttcccctggcccagagaatggggcc
ctcccaaggtctgctcagcccaggaccccttctttctcagcgcctctggccctgaaccgg
cccagtcaagagtctcttcccagaacaaactcggttgtagggagtgaggtttcaggcacg
atgcccaaacccactgtggaccctcaaccctggttccaagatgggcccaaatcttacctt
tctagctctgccccttcatcctctccagccggcatggaccatatgcagacgggtgctgtc
cctgggctgggtcccaagcctggctgtacagatcctggtgttatttccaagctcagcccc
aacagccttgcccatccagtgatgtccaccctgcctgagttaccttctaaagaaggtgcc
tccggctgggcctctgatggcagcctggggcctgtgctcccggagacgccgagttccccc
agagtgaggctaccctgccagacgctcatcccgggccctgagcttggacccacggccgcc
gaattgaagttagaagccctcacccagcgtctggagcgggagctggatgctcacccgaag
gccgattactttggagcctgtgtgaaatgcagcaagggggtgtttggggccggccaggcc
tgccaggccatggggaacctctaccacgatgcatgcttcacctgtgcggcctgcagccgg
aagctgagaggaaaagccttttatttcgtcaacggcaaagtgttctgcgaggaagacttc
ctgtactctggtttccagcagtccgctgacaggtgctttctctgtggacatctgatcatg
gacatgatcctgcaggccctggggaagtcctaccaccccggctgcttccgctgtgtcatc
tgtaatgagtgtttggacggggtgcccttcaccgtggactcagagaacaagatctactgt
gtccgggattaccacaaggtattggcccccaagtgtgcagcctgcggccttcccatcctt
cctcctgagggttcagatgagaccatccgtgtcgtgtccatggacagagactaccacgtg
gagtgttaccactgtgaggactgcggcctggagctcaatgatgaagacggtcaccgatgc
taccccctggaggaccacctgttctgccactcctgccacgtcaagaggctggagaagggc
ccctcgcccacagcccttcgccagcaccacttctag

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