KEGG   Ovis canadensis (bighorn sheep): 138424848
Entry
138424848         CDS       T11679                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
ocan  Ovis canadensis (bighorn sheep)
Pathway
ocan03013  Nucleocytoplasmic transport
ocan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138424848
  09122 Translation
   03013 Nucleocytoplasmic transport
    138424848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocan03019]
    138424848
   03041 Spliceosome [BR:ocan03041]
    138424848
Messenger RNA biogenesis [BR:ocan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     138424848
Spliceosome [BR:ocan03041]
 Complex C
  Other components
   EJC/TREX
    138424848
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    138424848
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 138424848
NCBI-ProteinID: XP_069418391
LinkDB
Position
1:complement(237536788..237685379)
AA seq 1592 aa
MAAATVVIPVEWIRNWEKSGRGEFLRLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKGDYFTRLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPIGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
QEIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEKMEKPPDNQKLGLLEALLKIGDWQHA
QSIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVSALQNKRAPKQA
ESFEDLRRDVFNMFCYLGPHLSHDPILFAKMVRIGKSFMKEFQSDGSKREDKEKTEVILS
CLLSITDQVLLPSLSLMDCNACMSEELWGMFKIFPYQHRYRLYGQWKNETYNSHALLVKV
KAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVIDSL
KYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGLL
QYVANQLKAGKSFDLLILKEVIQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRN
TKKSSQRLKDALLDHDLALPLCLLMAQQRNGIIFQEGEEKHLKLVGKLYDQCHDTLVQFG
GFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGSK
QQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFCATFWSLTMYDLAVPHTSYER
EVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEKD
NWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVF
SDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFDG
GNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG
QALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPLRNAVASVQ
NGPGGGPSSSLIRSVSKLDESSIEDTDKLKERSQCRVKAVNKASSAAPKGNSSNGNSGSN
SSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDSKEKPKEERPNKDEKAREMKERT
PKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKELSRERDIAKEMKSKENVKG
GEKTPVSGSLKSPVPRSDIAEPEREQKHRKIDTHPSPSHSSTVKVTAILPKVPLGSENYA
SSPVISIHCLQDSLIELKESSAKLYINHTPLPLSKNKEREMDKKDLDKSRERSREREKKD
EKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESAYPNERDKEKNKSK
SSGKEKGGNSFKSEKMDKISSGGKKGVDRPLS
NT seq 4779 nt   +upstreamnt  +downstreamnt
atggcggccgcaactgtggtgattcccgtagagtggataaggaactgggagaaatcaggg
agaggcgaatttttacgtttatgccggatcctcagtgaaaataaaagccacgatagttca
acttatagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaaaggagactattttacacgattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaaactgattgctgaactgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaattgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
caagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagagagagaaagaaaaggaaaaagaggaaaaaatggagaaaccacct
gacaaccaaaaacttggtttgttggaagccttgttaaagattggggattggcagcatgcg
cagagcattatggatcagatgccgccatactacgcagcttcacataaactaatagccctt
gctatttgcaagcttattcatataactattgagcctctctaccgaagagttggtgttcct
aaaggcgctaaaggctcacctgttagtgctttgcaaaataagagagcaccaaaacaagca
gagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccccac
ctttctcacgatcccattttattcgcaaaaatggtgcggataggcaagtcgtttatgaag
gagtttcagtctgatggaagcaaacgagaagataaagagaaaacggaagttatccttagc
tgtttgcttagcattactgaccaggtattacttccgtctctttctttgatggactgcaat
gcttgtatgtctgaggaactatggggaatgtttaaaatatttccgtatcagcatagatac
cgtctgtatggccagtggaagaatgaaacttacaacagtcatgcacttttagtaaaagtt
aaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtg
aagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgtttgat
tatatcttgtcacaaatacagaagtatgataacttgataacacctgtaatcgattcactg
aaatacctcacttcgttgaattatgatgtcttggcctattgtatcattgaagctttagct
aatccagaaaaggagaaaatgaaacatgacgacacaacaatctcaagttggcttcagagt
ctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtcttctt
cagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactgaaagaa
gtgatacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaactagaa
gccatgactggtggagagcaactaaaagctgagggtggttattttggccagataagaaac
actaaaaaatcctcccagagattaaaggatgcactattagaccatgatcttgctcttcct
ctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaggtgaagagaaa
catttaaaacttgtgggaaaactctatgatcagtgccatgataccctggtacagtttggt
ggttttttagcatctaatctaagcacagaagattatataaagcaagtgccttcaattgat
gtgctctgtaatgaatttcacacacctcatgatgcagcatttttcctgtctaggccaatg
tatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaagtaaa
cagcagcataaagttcataagtacatcacatcatgtgaaatggtgatggctcctgttcat
gaagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattctgt
gccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaacgg
gaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaggaaatgcctcca
aataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctcgaagaa
gaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaaggac
aactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagttgtgt
atatttcctcgatgtattttttccgcaattgatgctgtttactgtgctcgttttgttgaa
ttggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagttttc
tctgatataatttacacggtcgcaagctgtactgaaaatgaagctagtcgatatgggaga
ttcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatatgaa
aaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgatggt
ggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacacaaatggcat
tacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatacactcacatcagg
aatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctgggt
caggctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggccagat
ctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatgata
cctgaaaatgagtttcatcacaaagacccccctctgaggaatgcagttgccagtgtacaa
aatgggcctggtggtgggccttcttcatcgttgatcagaagtgtatctaagttggacgaa
agcagtatcgaggacactgataaattgaaggagagatctcagtgtcgtgtgaaagctgtt
aataaagcttctagtgccgcaccaaaagggaattcaagtaatggaaatagtggctctaac
agcagcaaagctgttaaagaaaatgacaaagagaaaggaaaagagaaagaaaaagagaaa
aaagaaaagactccagctactactccagaggcccgagtacttggtaaagatagtaaagaa
aaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaaagaaca
cctaaatctgacaaagagaaggaaaaattcaagaaggaagaaaaagctaaagatgagaaa
ttcaagaccactgtcccgaatgtagaatcaaagtcaactcaagaaaaggaaagagagaag
gagctgtccagagaacgagatatagcaaaggaaatgaaatcaaaggaaaatgttaaagga
ggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatattgca
gagcctgaaagggaacagaaacatcgcaaaattgatacccatccttctccatcacattcc
tcaacagtaaaggttacagccatacttcccaaagttcctctgggttctgagaactatgcc
agctcacctgtcatctccattcattgtctacaggacagtctcatcgaactcaaggagtct
tcagcaaagctctacattaatcatactcctctaccactgtccaagaataaggagagagaa
atggacaagaaagatttggacaagtcaagggaaagatccagagaaagagaaaaaaaagat
gaaaaggacaggaaagagcggaaaagggatcactcaaacaatgaccgagaagtgccacca
gacttaaccaagaggcggaaagaggaaaatggaacaatgggggtttcaaaacacaaaagt
gaaagtccatgtgagtctgcttatccaaatgagagagacaaggaaaaaaataagtcaaaa
tcttcaggcaaagaaaaaggtggcaactcatttaaatctgaaaagatggataaaatctcc
tctggtggcaaaaagggcgtggacagacccctaagctga

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