Ovis canadensis (bighorn sheep): 138424848
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Entry
138424848 CDS
T11679
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ocan Ovis canadensis (bighorn sheep)
Pathway
ocan03013
Nucleocytoplasmic transport
ocan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138424848
09122 Translation
03013 Nucleocytoplasmic transport
138424848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocan03019
]
138424848
03041 Spliceosome [BR:
ocan03041
]
138424848
Messenger RNA biogenesis [BR:
ocan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138424848
Spliceosome [BR:
ocan03041
]
Complex C
Other components
EJC/TREX
138424848
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138424848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
138424848
NCBI-ProteinID:
XP_069418391
LinkDB
All DBs
Position
1:complement(237536788..237685379)
Genome browser
AA seq
1592 aa
AA seq
DB search
MAAATVVIPVEWIRNWEKSGRGEFLRLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKGDYFTRLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPIGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
QEIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEKMEKPPDNQKLGLLEALLKIGDWQHA
QSIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVSALQNKRAPKQA
ESFEDLRRDVFNMFCYLGPHLSHDPILFAKMVRIGKSFMKEFQSDGSKREDKEKTEVILS
CLLSITDQVLLPSLSLMDCNACMSEELWGMFKIFPYQHRYRLYGQWKNETYNSHALLVKV
KAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVIDSL
KYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGLL
QYVANQLKAGKSFDLLILKEVIQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRN
TKKSSQRLKDALLDHDLALPLCLLMAQQRNGIIFQEGEEKHLKLVGKLYDQCHDTLVQFG
GFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGSK
QQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFCATFWSLTMYDLAVPHTSYER
EVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEKD
NWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVF
SDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFDG
GNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG
QALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPLRNAVASVQ
NGPGGGPSSSLIRSVSKLDESSIEDTDKLKERSQCRVKAVNKASSAAPKGNSSNGNSGSN
SSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDSKEKPKEERPNKDEKAREMKERT
PKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKELSRERDIAKEMKSKENVKG
GEKTPVSGSLKSPVPRSDIAEPEREQKHRKIDTHPSPSHSSTVKVTAILPKVPLGSENYA
SSPVISIHCLQDSLIELKESSAKLYINHTPLPLSKNKEREMDKKDLDKSRERSREREKKD
EKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESAYPNERDKEKNKSK
SSGKEKGGNSFKSEKMDKISSGGKKGVDRPLS
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtgattcccgtagagtggataaggaactgggagaaatcaggg
agaggcgaatttttacgtttatgccggatcctcagtgaaaataaaagccacgatagttca
acttatagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaaaggagactattttacacgattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaaactgattgctgaactgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaattgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
caagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagagagagaaagaaaaggaaaaagaggaaaaaatggagaaaccacct
gacaaccaaaaacttggtttgttggaagccttgttaaagattggggattggcagcatgcg
cagagcattatggatcagatgccgccatactacgcagcttcacataaactaatagccctt
gctatttgcaagcttattcatataactattgagcctctctaccgaagagttggtgttcct
aaaggcgctaaaggctcacctgttagtgctttgcaaaataagagagcaccaaaacaagca
gagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccccac
ctttctcacgatcccattttattcgcaaaaatggtgcggataggcaagtcgtttatgaag
gagtttcagtctgatggaagcaaacgagaagataaagagaaaacggaagttatccttagc
tgtttgcttagcattactgaccaggtattacttccgtctctttctttgatggactgcaat
gcttgtatgtctgaggaactatggggaatgtttaaaatatttccgtatcagcatagatac
cgtctgtatggccagtggaagaatgaaacttacaacagtcatgcacttttagtaaaagtt
aaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtg
aagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgtttgat
tatatcttgtcacaaatacagaagtatgataacttgataacacctgtaatcgattcactg
aaatacctcacttcgttgaattatgatgtcttggcctattgtatcattgaagctttagct
aatccagaaaaggagaaaatgaaacatgacgacacaacaatctcaagttggcttcagagt
ctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtcttctt
cagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactgaaagaa
gtgatacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaactagaa
gccatgactggtggagagcaactaaaagctgagggtggttattttggccagataagaaac
actaaaaaatcctcccagagattaaaggatgcactattagaccatgatcttgctcttcct
ctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaggtgaagagaaa
catttaaaacttgtgggaaaactctatgatcagtgccatgataccctggtacagtttggt
ggttttttagcatctaatctaagcacagaagattatataaagcaagtgccttcaattgat
gtgctctgtaatgaatttcacacacctcatgatgcagcatttttcctgtctaggccaatg
tatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaagtaaa
cagcagcataaagttcataagtacatcacatcatgtgaaatggtgatggctcctgttcat
gaagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattctgt
gccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaacgg
gaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaggaaatgcctcca
aataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctcgaagaa
gaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaaggac
aactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagttgtgt
atatttcctcgatgtattttttccgcaattgatgctgtttactgtgctcgttttgttgaa
ttggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagttttc
tctgatataatttacacggtcgcaagctgtactgaaaatgaagctagtcgatatgggaga
ttcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatatgaa
aaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgatggt
ggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacacaaatggcat
tacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatacactcacatcagg
aatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctgggt
caggctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggccagat
ctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatgata
cctgaaaatgagtttcatcacaaagacccccctctgaggaatgcagttgccagtgtacaa
aatgggcctggtggtgggccttcttcatcgttgatcagaagtgtatctaagttggacgaa
agcagtatcgaggacactgataaattgaaggagagatctcagtgtcgtgtgaaagctgtt
aataaagcttctagtgccgcaccaaaagggaattcaagtaatggaaatagtggctctaac
agcagcaaagctgttaaagaaaatgacaaagagaaaggaaaagagaaagaaaaagagaaa
aaagaaaagactccagctactactccagaggcccgagtacttggtaaagatagtaaagaa
aaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaaagaaca
cctaaatctgacaaagagaaggaaaaattcaagaaggaagaaaaagctaaagatgagaaa
ttcaagaccactgtcccgaatgtagaatcaaagtcaactcaagaaaaggaaagagagaag
gagctgtccagagaacgagatatagcaaaggaaatgaaatcaaaggaaaatgttaaagga
ggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatattgca
gagcctgaaagggaacagaaacatcgcaaaattgatacccatccttctccatcacattcc
tcaacagtaaaggttacagccatacttcccaaagttcctctgggttctgagaactatgcc
agctcacctgtcatctccattcattgtctacaggacagtctcatcgaactcaaggagtct
tcagcaaagctctacattaatcatactcctctaccactgtccaagaataaggagagagaa
atggacaagaaagatttggacaagtcaagggaaagatccagagaaagagaaaaaaaagat
gaaaaggacaggaaagagcggaaaagggatcactcaaacaatgaccgagaagtgccacca
gacttaaccaagaggcggaaagaggaaaatggaacaatgggggtttcaaaacacaaaagt
gaaagtccatgtgagtctgcttatccaaatgagagagacaaggaaaaaaataagtcaaaa
tcttcaggcaaagaaaaaggtggcaactcatttaaatctgaaaagatggataaaatctcc
tctggtggcaaaaagggcgtggacagacccctaagctga
DBGET
integrated database retrieval system