KEGG   Ovis canadensis (bighorn sheep): 138432527
Entry
138432527         CDS       T11679                                 
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
ocan  Ovis canadensis (bighorn sheep)
Brite
KEGG Orthology (KO) [BR:ocan00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ocan03037]
    138432527 (WHRN)
Cilium and associated proteins [BR:ocan03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   138432527 (WHRN)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 T15H9-4_C CCM2_C USH1C_N HHD_RTEL1 PAH_ZNF598 WIV_dom_3
Other DBs
NCBI-GeneID: 138432527
NCBI-ProteinID: XP_069429945
LinkDB
Position
2:9332104..9423451
AA seq 918 aa
MNAQLDGLSVGSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PYRQPVWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHGSALRQHEGDRRSTLRLLQGGDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYVTGVDPGSEAESSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSQHLILTVKDVG
RLPHARTTVDETKWIASSRIGDAAANCAGFPGDLTAEGTDKLGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHLLTEQERATVAYYLEEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLDRFDHLVLRREIESMKARQPPGPAAGDTYSTVSYSDTGSSTGSHGTSTTVSS
ARERLLWLIDLMENTLDLEETGEAVQGNVNTLSDVSLDDVKSTSKGLPSYKPPPPPPPLT
QGHDHLLIQPRKPGREDLQPPSSTSSHSGIVFSAPRNRSPPAGTAPVPEAPTAQDSPSSP
IYASISPANPGSNRPLDTHLALVNQHPIGPFPRVQSPPHLKSPPAEATLAGGGLSPPSPS
SRPDQAGTNQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAG
EAEASAPGRGRQTAPARSRTGKETPRNERPAEGATKPPGLLEPTSTLIRVKKSAATLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGVTLRGKEHREAARIIAEAFK
TKERDYIDFLVTEFNVLL
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaacgcgcagctggacggcctgtcggtgggctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcgactgctgtctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacgcac
tgcctgaacgcctaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtg
ctgctggacagcccggtcaagcggcgcctgctgccgatgctgcggctggtcatcccgcgc
tccgaccagctgctcttcgaccagtatacggcggagggcctctacctgcccgccaccacc
ccctacaggcaacccgtctggggcggccccgacggcgcggggcccggggaggtgcgcctg
gtgagcctgcggcgcgccaaggcccacgagggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctatgtgtcgctggtggagccgggctccctggccgagaaggag
gggctgagagtcggggaccagattctgcgtgtcaacgacaaatccctggcccgagtgacc
cacgctgaagctgtcaaggctctcaagggctccaagaagctggtgctgtcggtgtactca
gcggggcgcatccccggtggctacgtcaccaaccacatctacacctgggtggacccccag
ggccgcagcatctccccaccttcaggcctgccccagccccacggcagcgccctgcggcag
catgagggtgaccggaggagcaccctgcgcctcctgcaaggcggggatgagaaaaaggtg
aacctggtgctgggggacggccggtccctgggcctcaccatccgcgggggagcagagtac
ggcctgggcatttacgtcaccggcgtggacccgggctccgaagcagagagcagcgggctc
aaggttggggaccagattctggaggtgaatgggcggagctttctcaacatcctgcacgat
gaggcggtcaggctgctcaagtcatcccagcatctcatcctgaccgtgaaggacgtcggg
aggctgccccacgcccgcaccaccgtggacgagaccaagtggatcgccagttcccggatt
ggagacgctgccgccaactgcgcggggtttcccggggatctcacagcagaagggaccgac
aagctggggttttacaaggggccagccggctcccaggtgaccctgagcagcctggggaac
cagacgcgggtgctgctggaggagcaggcgcggcacctgctgaccgagcaggagcgtgcc
accgtggcctactacctggaggagtaccgcggaggcagcgtatcggtggaagccctagtc
atggccctgtttgagctgctcaacacccacgccaagttctcgctcctctctgaggtgaga
ggcaccatctccccccaagacctggaccgcttcgaccatctggtgctgagacgggagatt
gagtccatgaaggcgcggcagcccccgggtcctgcagccggggacacctactccacggtc
tcctacagcgacacgggctcgtccacaggcagccacggcacctccaccaccgtcagctcg
gccagggagcggctgctgtggcttatagacctgatggagaacactctggacctggaggag
accggggaggccgtccagggcaatgtgaacaccctctcagacgtttccctggatgatgtc
aagtccacctccaaggggctgcctagctacaagccgccgcctccccctccccctctgacc
caaggccacgaccacctcctcatccagccgaggaagccaggcagagaggacctccagccg
ccttcctccacgtcttcccactcgggcatcgtcttctcggctccgcggaacaggagcccg
cccgcgggtaccgctcctgtgccggaggcccccacagcacaggactcgccctcctccccc
atctacgcctccatctccccggccaaccccggctccaataggccgctggacacccacctg
gccctggtcaaccagcaccccatcggccccttcccgcgggtccagtcacccccgcacctg
aaaagcccccctgcagaggccacgttggctggcggtggcctttccccaccctccccctcc
agccgcccagaccaggcgggcacgaaccagcattttgtcctggtggaggtgcaccgcccg
gacagcgagccagacgtgaatgaagtgagggcgctgccccaaacacgcaccgcctccacg
ctctcccagctctcagatagcgggcagaccctgagcgaggacagtggcgtggacgctggc
gaggccgaggccagcgcccctggccgaggcagacagacggcgcccgccaggagcagaact
ggcaaggagacacctcggaacgagaggcccgccgagggggccaccaaacctcctgggctc
ttggagcccacgtccaccctcatccgcgtgaagaaaagtgcggccaccctgggcattgcc
atcgagggtggtgccaacacccgccagcctctgcctaggatcgtcacaattcagcgaggc
ggctcagcccacaactgcgggcagctcaaggtggggcacgtgatcctggaagtgaacggg
gtgacgcttcggggcaaggagcaccgggaggccgcgcgcatcatcgcggaggccttcaag
accaaggagcgcgactacatcgactttctggtcaccgagttcaacgtgctgctctag

DBGET integrated database retrieval system