KEGG   Ovis canadensis (bighorn sheep): 138443961
Entry
138443961         CDS       T11679                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ocan  Ovis canadensis (bighorn sheep)
Pathway
ocan03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ocan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138443961 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocan03400]
    138443961 (TDP1)
DNA repair and recombination proteins [BR:ocan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138443961 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 138443961
NCBI-ProteinID: XP_069453378
LinkDB
Position
7:112045423..112127016
AA seq 612 aa
MMSQEGNYGKWTISSSDESEEEKPQPDKPSASLLPDTGQGAAGQPKYTCSEARKAAHRRK
LEPVKFSSTDSASEASPCKRQKSGSQEDLGWCLSSSEDELPPEQQQEQAKDPRVKEEKGP
PSPRGRAARGAGPHGPPTSRGLPDEEDEQEMSGEGQDIWDLLDKGNPFQFYLTRVSGIKP
KYNTGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVRQYPPEFRKKPVLLVHGDKREAKA
HLLAEAKPYGNVTLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGI
WLSPLYPRIVHGTHGSGESATHFKADLISYLAAYNAAPLKEWIDTIQEHDLSETNVYLIA
STPGRFQGNQKDNWGHFRLRKLLKEHASPAPGAESWPVIGQFSSIGSMGADESKWLCSEF
KESLVTLGKESRTLGSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYF
HKWSADTSGRSNAMPHIKTYLRPSPDFSQIAWFLVTSANLSKAAWGALEKGGTQLMIRSY
ELGVLFLPSAFGLDSFKVKQKFFSGSSQEPTASFPVPYDLPPELYGDRDRPWIWNIPYVK
APDTHGNMWVPS
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgatgtcccaggaaggcaattatgggaagtggacaatatccagtagtgatgaaagtgag
gaggagaagccacagccggacaagccatctgcctctctcctccccgacactgggcagggg
gccgccgggcagccaaagtacacctgctccgaggctcggaaagccgcccacaggaggaag
ctggagcctgtgaaattcagcagcacagactcagcttcagaagcttcgccttgcaaaaga
cagaagagcgggtcccaggaggacctgggctggtgtctgtccagcagtgaggacgagctg
cctccagagcagcagcaggagcaggcgaaggacccgcgggtgaaagaggagaaaggcccc
ccttctcccaggggccgcgcggctcggggcgctgggccgcacggcccccccaccagccgt
gggctcccagacgaggaagatgagcaggaaatgtcaggggaaggccaggacatctgggac
ttgctggataaagggaaccctttccagttctacctcacgagagtctccgggattaagccc
aagtataacacgggagccctccacatcaaggatattttatctcctctctttgggacactt
gtttcttcagctcagtttaactactgctttgacgtggactggctcgtaagacagtatcca
ccagagttcaggaagaaaccagtcctgcttgtgcatggcgacaaacgggaagcaaaggct
cacctcctggccgaggcgaagccttatgggaatgtcaccctctgccaggcaaagttggat
attgcatttggaacacatcacacgaaaatgatgcttctgctgtacgaggaaggcctccgg
gttgtcatacacacctccaacctcatccgcgaggactggcaccagaaaacacagggaata
tggttgagccccttgtacccccgaatcgtccacgggacccacggatctggagagtcggcc
acacacttcaaagctgacctcatcagctacctggcagcttataacgccgcccctctcaag
gagtggatagacaccatccaggagcacgacctctcagaaacaaatgtttaccttattgcc
tcaaccccaggacgctttcaaggaaatcagaaagataattggggacatttcaggcttagg
aagcttctgaaggagcacgcctcccccgcacctggagcagaatcttggcctgtcataggt
cagttctccagcatcggctccatgggggcagacgaatcaaaatggttgtgttctgagttt
aaggagagcctggtgaccctgggcaaggagagcaggaccctaggaagtgctgttcctctc
catctgatctatccttcagtggaaaatgtgcggaccagcttagaaggatatccagctggg
ggctctcttccctatagcatccagacggcggagaaacagaattggcttcattcctatttt
cacaagtggtcagctgacacgtcaggccgcagcaacgccatgccacatatcaagacttac
ctgagaccctctccagacttcagtcagattgcttggttccttgtcacgagcgccaacctg
tccaaggccgcctggggcgcgctggagaagggcggcacccagctgatgatccgctcctac
gagctcggcgtcctctttctgccctcagcgtttggcctggacagtttcaaagtgaaacag
aaattcttctctgggagcagccaggagcccacagcctccttccctgtgccgtacgacctg
cctccagaactgtacggagacagagatcgaccatggatttggaacatcccttatgtcaaa
gcacctgatacacacgggaacatgtgggttccctcctga

DBGET integrated database retrieval system