Ovis canadensis (bighorn sheep): 138446554
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Entry
138446554 CDS
T11679
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
ocan Ovis canadensis (bighorn sheep)
Pathway
ocan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138446554 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocan03019
]
138446554 (EXOSC8)
Messenger RNA biogenesis [BR:
ocan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138446554 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138446554
NCBI-ProteinID:
XP_069457652
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All DBs
Position
10:complement(38942281..38950156)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSSLVKLGNTTVIC
GIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVFKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaactgtggaacctctggagtattacaggagatttctgaaagag
aattgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacgtaggt
tcgattggtaccgcagatggttcttctttagtgaagcttggaaatactacagtaatttgt
ggaattaaagcggaatttggagcaccaccaacagatgcccctgataaaggatatgttgtt
cctaacgtggacctgtcacctctgtgttcgtggagatttcggtctggccctcctggagaa
gaggcccaggtggccagccagttcatcgcagatgtcattgagaattcacagataattcag
aaagaagacttatgcatctcttcaggaaagcttgcttgggttttgtactgtgatctcatt
tgcctcaaccacgatggaaacattttggatgcttgtacctttgctctgttagcagcttta
aaaaatgtccagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactctgcttatagttgatcccactgaagaggaggaacatctggcaacggga
accctaacagttgtaatggacgaggaaggcaagctctgttgtcttcacaaaccaggtgga
agtggactgactggagctaaacttcaagactgtatgagccgagcagttacaagacacaaa
gaagtaaaaaaactgatggatgaagtatttaagagtatgaaacccaaataa
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