Ovis canadensis (bighorn sheep): 138446708 Help Entry 138446708         CDS       T11679                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ocan  Ovis canadensis (bighorn sheep) Pathway ocan04151   PI3K-Akt signaling pathway ocan04382   Cornified envelope formation ocan04510   Focal adhesion ocan04512   ECM-receptor interaction ocan04518   Integrin signaling ocan04820   Cytoskeleton in muscle cells ocan04926   Relaxin signaling pathway ocan04933   AGE-RAGE signaling pathway in diabetic complications ocan04974   Protein digestion and absorption ocan05146   Amoebiasis ocan05165   Human papillomavirus infection ocan05200   Pathways in cancer ocan05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:ocan00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     138446708 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     138446708 (COL4A1)    04518 Integrin signaling     138446708 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     138446708 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     138446708 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     138446708 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     138446708 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     138446708 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     138446708 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     138446708 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     138446708 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     138446708 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     138446708 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ocan04147]     138446708 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:ocan00536]     138446708 (COL4A1) Exosome [BR:ocan04147]  Exosomal proteins   Exosomal proteins of other cancer cells    138446708 (COL4A1) Glycosaminoglycan binding proteins [BR:ocan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138446708 (COL4A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  138446708 NCBI-ProteinID:  XP_069458112 LinkDB All DBs Position 10:complement(98275400..98404861) Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLGLAALLLHEESSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPSGVPGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPAGPPGLPGFAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGYPGQ PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPP GLPGQAQVITKGDTAMRGEKGQKGEPGFPGLQGFGEKGEPGKPGPRGKPGKDGEKGEKGS QGFPGDSGYPGQPGREGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGP KGYPGIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGVSLPGPSGRDGLPGPPGPPG PPGQPGHTNGLVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDTTELRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRAGVEGTPGPQGAPGLMGQPGAKGEPGEIYFDLRLK GDKGDPGLPGQPGMPGRAGSPGRDGQPGLPGPRGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPIGDKGQMGFPGNPGAPGQPGPKGEAGKVVPLPGPPGAEGLPGSPGFQ GPQGDRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGIDGLPGDAGPPGNPGRQGFNG LPGNPGPPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAIGPPGLQGL RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGSPGQPGIPGPKGEMGVMGTPGQPGSPGPAGVPG LPGAKGEHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGIPGAPGLPGPKGSTGGMGLPG MPGPKGVAGIPGPQGIPGLPGDKGAKGEKGQAGLPGIGIPGRPGEKGDQGLAGFPGSPGE KGEKGSTGIPGMPGAPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGK PGPTGPAGQKGEPGSDGIPGSVGEKGEAGLPGRGFPGFPGSKGEKGSKGDVGFPGLAGSP GIPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGHPGPMGPPGLPG LDGLKGDKGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDMGPPGVPGFHGQKG APGLQGVKGDQGDQGFPGTKGLPGPPGPPGPFNIIKGEPGLPGPEGPAGLKGLQGPPGPK GQQGVTGSAGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPAGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtgtggctgctgctggggctcgccgcgctcctgctccacgag gagagcagccgcgccgccgcgaagggtgggtgtgccggctctggctgcgggaagtgtgac tgccatggcgtgaaaggacagaagggagaaagaggccttccggggttacaaggggtcatc gggtttcccggaatgcaaggacccgaggggccgcagggaccaccgggacagaagggtgac accggcgagcccggactgccaggcactaaagggacaagaggaccctcgggagtgcctggt taccctggaaacccaggacttcctggtattcctggccaggacggtcctccgggtccccca ggtattccaggatgtaacgggacaaagggtgagagagggcccgcgggacctcccggtttg cctggattcgccggaaatcccggaccaccagggttaccgggaatgaagggagatccaggt gagattctgggccacataccagggaccctgctgaaaggcgaaagaggatatcctggacag ccgggagcgcctggttcaccaggcctaccaggactgcaaggccccgtcgggcccccagga ttcaccgggccaccaggccctccaggccctcctggccctccaggcgaaaaggggcaaatg ggcttgagctttcaagggccgaaaggtgaaaagggtgatcaaggggtcagcgggcccccg ggattaccaggacaggctcaagtcatcacgaaaggggacacagccatgcgcggcgagaag ggtcaaaaaggtgaacccggatttccggggctgcaagggtttggagagaaaggagaacct ggaaaaccagggccccgcggaaaaccaggaaaagatggtgaaaaaggagaaaaagggagt caagggtttccgggcgattcagggtacccaggacagccaggtcgagaaggcttaaaggga gagaaaggtgaagcaggtcctcccgggctgcctggaactgttattggcacaggacccttg ggagagaaaggagagcccgggtacccagggggcccaggggcgaaaggggagacaggtccc aaaggttacccaggaataccaggccagccaggccctccaggcttcccgactccggggctg attggtgcccccggcttccccggcgacagaggcgagaagggtgaaccgggcttgccgggc gtgtcgctgccgggacccagcggaagggacgggcttcccggcccccccgggccccccggg ccccctgggcagccgggccacacaaatggactcgtggaatgccagcctgggccgccaggg gaccagggtcctcccggaattccagggcagccggggttgacgggcgaagttggagaaaaa ggtcaaaaaggagacagctgcctcgtctgtgacactacagagcttcgtgggcccccaggg ccacagggaccccccggagaaataggtttcccaggacaaccaggggccaagggagacaga ggcttgcccggcagggctggtgtggaaggaacgcctggtcctcaaggtgcgccagggctc atgggccagccgggagccaagggcgagcccggcgagatctacttcgacctacggctcaag ggcgacaaaggagaccccggcttaccaggccagcccggcatgccaggcagagcgggctcc cctggaagggacggccaaccgggcctccccggccccagaggctccccgggttcagtagga ttgaaaggggagcgtggccccccgggaggcgtcggattccccgggagccgtggcgacatc ggccctccggggcctccaggcttcggcccgattggccccattggtgacaaaggacaaatg ggcttcccaggaaaccctggggccccaggccagccaggtcccaagggagaggcgggaaaa gtcgtgcccttgcccggcccccctggagcagaagggcttcccgggtcccccggcttccag gggccacaaggtgaccgaggttttcctggaagccccggaaggccgggcctccccggagag aagggtgccattggccagcctgggattggatttcctgggcctcccggccccaaaggcatt gatggtttacctggagacgctggacctcctgggaatccgggtcgtcaaggcttcaacggc ttacctggcaaccccggcccacctggccagaagggcgagcctggagtcggtctgccggga ctcaaaggcctgcctgggatacctggcatccctggcacccccggggagaagggaaacgtc ggaggaccgggcgttcctggagagcatggcgccatcggccccccaggcctccaggggctc agaggtgacccgggacctcctggattgcaaggccccaaaggagcgccgggagtccctgga atcggcccccctggagcaatgggcccccccggaggacagggacccccagggtcatcaggc ccccccggagtgaaaggagagaaaggcttccccggcttcccaggtctggacatgccgggc cccaaaggagacaaagggtcccaggggctccccggcctgacggggcagtcggggctgcct ggccttcctggacagcagggctcccctggccagcctggcattccaggtcccaagggagag atgggagtcatggggactccggggcagcccggctcgccaggaccagcgggcgtgccagga ttgccgggtgccaaaggggaacacggcttccctggctcctcaggacccaggggagaccct ggcttcaagggtgacaaaggcgacgtggggctccccggcaagccaggctccatggataag gtggacatgggcagcatgaagggcgagaagggggaccaaggcgagaaaggacagactggt ccgactggcgataaaggatcccgcggagacccgggaaccccaggcgtgccgggaaaggac ggtcaggcaggacaccccgggcagccaggacctaaaggtgatccaggtgtgagtgggatc cctggtgctccgggacttcctggtcccaaaggatccactggtggaatgggcctcccagga atgccgggaccaaaaggtgtggctggcatccccggcccgcagggcattcctggcttacct ggagacaagggggcaaaaggagagaaagggcaggcgggtctgcctggcattgggattcca ggacggcctggggagaagggagaccagggccttgcaggatttcccggaagccccggcgag aagggagagaaaggaagcacggggatcccagggatgcccggggctccgggccccaaaggc tccccgggcagtgttggctatccgggaagccctgggttgcctggggagaaaggtgacaag ggcctcccgggactggatggcattcctggcatcaaaggagaagcaggtcttcctgggaag cctggccccacgggcccagccggccagaaaggggagcctggcagcgatggaatcccaggg tcggtgggagagaagggcgaggcaggtctacctggaagaggattcccagggtttccaggg agcaaaggagagaaaggttcaaagggcgatgtgggcttcccaggattagccgggagccca ggaattcctggatccaaaggagaacaaggattcatgggtcccccgggaccacagggacag ccgggattgccagggaccccaggccacgcggtagaggggcccaaaggagaccgcggcccg caaggacaacccggcctgccagggcatccgggacccatggggcctccaggcctccccggg ctcgatgggctgaaaggtgacaaggggaacccaggctggccgggcactccgggagctcca gggcccaagggagacccaggattccagggcatgccgggcattggcggctctccaggaatc acaggagctaagggagatatgggacccccaggagttccagggtttcacggtcagaaaggc gcccccggcctgcagggagtcaaaggcgaccaaggagaccaaggcttcccgggaacgaaa ggtcttcccggccccccgggccccccaggtccattcaacatcatcaagggggaaccaggg ctccctggtcccgagggccccgcgggtctgaaagggcttcagggacctccaggcccaaaa ggacagcaaggtgtgacgggatccgcaggcttgcctggacccccaggtgagcctggcttt gacggcgcccctggccagaaaggagagaccgggcccttcggccctccaggtccacgaggc ttcccgggtccgcccggccccgacgggctgccggggtccatgggtcccccaggcaccccg tcagtcgatcacggcttccttgtgacccggcacagtcagacgacagacgacccccagtgc cctcctgggaccaaaatcctctaccacggctactctttgctctacgtgcaaggcaacgag cgggcgcacggccaggacttgggcacggcgggcagctgcctgcggaagttcagcaccatg cccttcctcttttgcaacattaacaacgtctgcaacttcgcttcccgcaacgactactcg tactggctgtccacgccggagcccatgcccatgtccatggcgcccatcaccggggagaac atccggcccttcatcagcaggtgtgctgtgtgtgaggccccagcgatggtgatggccgtg cacagccagaccatccagatcccgcagtgccccgccggctggtcctcgctctggatcggc tactcctttgtgatgcacaccagcgccggggctgaaggctctggccaagccctcgcctcc cccggctcgtgtctggaggagttcagaagcgcccccttcatcgagtgccacggccgcgga acttgcaattactacgcaaacgcttacagcttttggcttgccacgatagagcggagcgag atgttcaagaagcccacgccgtccacgctgaaggccggggagctgcgcacgcacgtcagc cggtgccaggtgtgcatgcggaggacataa

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