Ovis canadensis (bighorn sheep): 138447331
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Entry
138447331 CDS
T11679
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ocan Ovis canadensis (bighorn sheep)
Pathway
ocan03030
DNA replication
ocan03420
Nucleotide excision repair
ocan03430
Mismatch repair
ocan03440
Homologous recombination
ocan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138447331 (RPA1)
03420 Nucleotide excision repair
138447331 (RPA1)
03430 Mismatch repair
138447331 (RPA1)
03440 Homologous recombination
138447331 (RPA1)
03460 Fanconi anemia pathway
138447331 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocan03000
]
138447331 (RPA1)
03032 DNA replication proteins [BR:
ocan03032
]
138447331 (RPA1)
03400 DNA repair and recombination proteins [BR:
ocan03400
]
138447331 (RPA1)
Transcription factors [BR:
ocan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138447331 (RPA1)
DNA replication proteins [BR:
ocan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138447331 (RPA1)
DNA repair and recombination proteins [BR:
ocan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138447331 (RPA1)
MMR (mismatch excision repair)
138447331 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
138447331 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
Ubiquitin_At1g33420
IBR
DUF8512
Motif
Other DBs
NCBI-GeneID:
138447331
NCBI-ProteinID:
XP_069459155
LinkDB
All DBs
Position
11:31474814..31519290
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMEVEVLKSAEAVGSKIGNPVPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGVASTASKAFGASKTFGKAGGTSQVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGRHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYK
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaacagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcttctttcatgttggcaaca
cagctgaaccctcttgttgaggaagagcaattgtctagcaactgtatttgccagattaac
cgatttattgtgaacacgctgaaagatggaaggagagtggttattttgatggaggtagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaatccggtaccttataatgaa
ggacacggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaatgggagcccaggagtggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagctggcggtaccagccaagtgaacagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccataccaatccaagtggactatctgt
gctcgtgtcaccaacaaaagtcagatccgcacctggagcaactctcgaggggaaggaaag
cttttctccatagagctggttgatgagagtggtgaaatcagagcgactgctttcaatgag
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaacgactacgagatgaccttc
aacaatgagacttctgtcatgccctgtgaagacggtcgtcacttacccacagttcagttt
gatttcacggggattggcgacctggagagcaaatctaaagactcacttgtggacataatc
gggatctgcaagaactacgaagatgtcacaaaaatcacagtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggacatgtcagggaaggtagtgaacgctaccctg
tggggagacgatgctgataaatttgatggttctagacaacctgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactatcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaacacc
aactggaaaactttatatgaggtcaagtcggagaacctgggccaaggtgacaagcctgac
tattttagctctgtggcaaccgtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggattgtaacaagaaagtgattgaccagcagaatggattgtaccgctgc
gagaagtgtgacagtgaattccccaacttcaagtaccgcatgatcctgtcagtcaatatt
gccgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaaacactgcatatctcggggaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaagctggagacc
tacaatgatgagtctcggattaaggccacggtggtggatgtgaagcctgtggactacaaa
gaatacggcagaaggctggtcatgaacatcaggaggaatgcggcgatgtga
DBGET
integrated database retrieval system
