Ovis canadensis (bighorn sheep): 138931203
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Entry
138931203 CDS
T11679
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ocan Ovis canadensis (bighorn sheep)
Pathway
ocan04151
PI3K-Akt signaling pathway
ocan04382
Cornified envelope formation
ocan04510
Focal adhesion
ocan04512
ECM-receptor interaction
ocan04518
Integrin signaling
ocan04820
Cytoskeleton in muscle cells
ocan04926
Relaxin signaling pathway
ocan04933
AGE-RAGE signaling pathway in diabetic complications
ocan04974
Protein digestion and absorption
ocan05146
Amoebiasis
ocan05165
Human papillomavirus infection
ocan05200
Pathways in cancer
ocan05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ocan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138931203 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138931203 (COL4A6)
04518 Integrin signaling
138931203 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138931203 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138931203 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
138931203 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
138931203 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
138931203 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138931203 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
138931203 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138931203 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
138931203 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
138931203 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocan04147
]
138931203 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
ocan00536
]
138931203 (COL4A6)
Exosome [BR:
ocan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138931203 (COL4A6)
Glycosaminoglycan binding proteins [BR:
ocan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138931203 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
138931203
NCBI-ProteinID:
XP_070148236
LinkDB
All DBs
Position
X:128979601..129325028
Genome browser
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGDRGSPGPLGPHGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGLPGLPGQKGSKGEPAFAQGSFKGMKGEPGLPGLD
GITGPQGTPGSPGAVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGTQGALGLKGQRGNPGQTTTGAA
GLPGRDGLPGLPGLPGPPGAASETGTLQSTEPGSLGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPTGPKG
KKGDPTLSTGSGMPGDRGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHAGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCKEEVGKK
DLDAEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGSKGAPGDILGAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPGLKGEKGSAGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGDPGPFGIPGHRPPMLNLRFKGDKGSQGSAGAVGFPGPRGDKGEAGHPGPPGLPGAPG
FPNLIKGLSGRPGPPGSTGLRGLPGLKGHPGITGFPGIRGESGSQGLSGAPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGEPGFKGVKGKDGPVGDVGFPGNKGEDGKAGISGDAGL
PGSLGLPGVAGMRGNPGLPGSPGHSGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
RGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGAVGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDSGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGTNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNVNEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPISETLKAGQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttgaaaggagacaggggc
tccccaggcccactgggaccgcatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattccgggcttcctggactacctgggcttcctggtcagaaaggctctaaaggtgaacct
gcctttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactggcccacaaggaacacccggatccccaggagctgtaggacccataggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggaataagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggaccaaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacccggc
cctcctggtgcccctggattaccggctttaccaggtggccctggtgctctgggcacccag
ggagctctaggcctgaaggggcaacgaggaaaccctggccagaccacaacgggggcagct
ggtctccctggcagagatggtttgccaggcctgccaggcctaccaggcccacctggtgca
gcatctgagacaggaaccctacagagcacagaaccgggatcgctgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccgactctcagcacaggatcagggatgccaggagatcgaggtgatcct
ggcccccaggggctccctggtgagacgggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccatgctggtccaactggccccccaggaatcgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaaa
gacttagacgcagagggaggtatcaccttgccttgtattattcctggaccatatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaaggagaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaaagttggcagccccggcttaccaggt
tccaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggagcaaggt
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgcgtgggtcagccaggccccccaggccctagtggtctatttggcatcaagggc
aaacccggcctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccaggaccaccagggccaattggcttcctgggaaactcaggcttgccaggg
gctactgggttgccagggctgccaggtctgaagggtgagaaggggtctgctggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgacccaggcccctttgggatacccggtcatcgacctccaatgctaaacctc
cgcttcaaaggagacaaaggttctcagggctcagctggagccgttggatttcccggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagctcctggc
ttccccaacctcatcaaggggcttagtgggagaccaggcccccctggctccacaggacta
cggggcttacctggcctgaagggacaccctggaatcacaggtttcccaggaattcgagga
gaaagtggttcacaaggtctcagtggagctcccgggctaccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggacccaaggga
caacctggggagcctggcttcaaaggtgtgaaaggaaaagacggaccagttggtgatgtg
ggtttcccaggaaacaaaggtgaagatgggaaagctggtatttctggagacgctggcctt
cctggctccctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccactcaggggcaactgggcccctgggtccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttacatggactgaatgggcttccaggaaccaaggggacc
cgtggaactccaggacctagtataactggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcgccgttggtctccccggtgca
ctgggcctctccttgccttcagtcatagaaggacagcctggcgaccctgggcgaccaggc
ctagatggagaacgaggccgcccaggcccccctgggcccccaggcccccctgggccctcc
tcagatcaaggcgaccctggagactctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatccggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggccttcca
ggcattgatggcatccctggcctcatgggagaccccggagtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccccggcaaagatggcaccaatggactccctggc
ccacctggggctcttggtgatcctggtctgcctggactacaaggccctccaggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctgggcagagcctgaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccagcggg
atgagccagctctgggtgggttacagcctgctgtttgtggaggggcaagagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaatgtgaatgaagtgtgccactatgcccgacggaacgacaagtcctactggctc
tccaccactgcccctatccctatgatgcctgtcggccagacacagatcccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcacagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggcgggggccagtccctggtctctcctggatcctgccta
gaggatttccgggctactcctttcatcgagtgcagtggtgcccggggcacctgccactac
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagtttggggag
gagcctatatctgagacgctgaaagccggacagctccacacccgggtcagccgctgccag
gtgtgtatgaaaagcgtgtag
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integrated database retrieval system
