Oceanobacillus sp. 143: CV093_00795
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Entry
CV093_00795 CDS
T06339
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ocb
Oceanobacillus sp. 143
Pathway
ocb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CV093_00795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocb03021
]
CV093_00795
03400 DNA repair and recombination proteins [BR:
ocb03400
]
CV093_00795
Enzymes [BR:
ocb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CV093_00795
Transcription machinery [BR:
ocb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CV093_00795
DNA repair and recombination proteins [BR:
ocb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CV093_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF961
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QGS67815
LinkDB
All DBs
Position
143539..144483
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPNIETIEISDDATFGKFVVEPLERGYGATLGNSLRRILLSSLPGAAVTSIQIDG
ALHEFSTIDGVVEDVTQIILSLKKLALKIYSDEPKTIELSVQGEGVVTAADLTYDSDVEV
LNPELKIATLNSKGALNMRMTAERGRGYRQAEQNKHEDQPIGVIAIDSIFTPVSRVSYQV
ENTRVGQNANYDKLTLDVSTDGSIRPEEAVSLGAKIVTEHFNIFVGLTDEAQNAEIMVEK
EEDQKEKVMEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEDMMKVRNLGRKSLEEVK
HKLADLDLGLRNDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaagccaaatattgaaacgattgaaattagcgacgatgctactttc
gggaaattcgtagtagaaccacttgaacgtggatatggtgccactctaggaaactccttg
cgtcgtatcttactatcctcacttccaggtgctgctgttacatcaattcaaattgatggt
gctttacatgagttctcgacgattgatggagttgtggaagatgtcactcaaattattttg
agcttaaagaagttagcacttaagatttattctgatgaaccgaaaacaatcgaattatct
gttcaaggtgaaggggtagtaactgctgctgacctcacgtatgacagtgatgtagaagtg
ttgaatccggaattgaagatcgctactttaaatagtaaaggcgctttaaacatgagaatg
acagctgagcgtggtcgaggatatcgccaagctgagcagaataaacatgaggatcaacca
ataggcgttattgcgattgattcaatctttacacctgtatcacgtgtttcctaccaagta
gaaaacactcgagtaggtcaaaatgcaaactatgataaattaacattagatgtctctaca
gatggaagcattcgtcctgaagaagcagtttctttgggtgctaaaatcgttacagagcat
tttaatattttcgtagggctaacggatgaggcacaaaatgccgaaatcatggttgaaaaa
gaggaagaccaaaaagagaaagttatggaaatgacaatcgaagaacttgatctttctgtt
aggtcttataactgcttaaaacgcgctggaattaataccgttcaagagcttgcaaataag
agcgaagaagatatgatgaaggttcgtaatttaggtcgtaaatcacttgaagaagttaaa
cataaattagcagatcttgatttaggtttgcgtaatgacgactga
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