Oceanobacillus sp. 143: CV093_11625
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Entry
CV093_11625 CDS
T06339
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ocb
Oceanobacillus sp. 143
Pathway
ocb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CV093_11625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocb03400
]
CV093_11625
Enzymes [BR:
ocb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CV093_11625
DNA repair and recombination proteins [BR:
ocb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CV093_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF7624
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QGS68849
LinkDB
All DBs
Position
complement(2167044..2168393)
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AA seq
449 aa
AA seq
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MENKYLTVAALTKYIKRKIDVDPHLKDVLLKGEISNFSHHSRGHMYMTIKDDQAKIQAVM
FAGNNRYLKFKPENGMNVLIRGEISVYEAFGQYQLYIQQMEPDGIGSLYLAFEQLKEKLH
KQGYFDQGHKKEIPLFPEHIGVITSPTGAAVRDIITTIKRRYPIVQVTIIPVLVQGESAA
RSIADAVDLANNLDLFDTLIVGRGGGSIEELWAFNEEIVAESIFRSKIPIISAVGHETDI
TISDYVADLRAPTPTGAAELAVQSQIELREKIDTLTRSLTRELTNEMRNHQRHLERLKGA
YAFRYPEQLIKQKEQALDSFVLSLQKEMIATKKEKETRLLNLYKRLITQHPQKQLEQSKI
KLDEKIKSQNYYMTKLLENKSIQLTNTIDKLFLVNPLEIMKRGFSLSYTAGNEIIKSTNQ
VKANDYIKIKLSDGKINCQVVEVEEESKS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataagtacttaacagtcgctgccctcacaaagtatattaaacgtaaaattgac
gttgatccacacttaaaagatgtattgttaaagggggaaatatcaaatttcagtcatcat
agtcgcggacatatgtatatgacgattaaagatgatcaagcaaagattcaggcagtaatg
tttgcaggaaataatcgatatttaaaatttaaacccgaaaatgggatgaatgtattaatc
agaggtgaaataagtgtttatgaagcctttggtcagtaccagctatacattcagcaaatg
gagccagatggaataggttctttatatttagcctttgagcagttgaaagaaaaattacat
aagcaaggttattttgatcaaggtcacaaaaaagaaatccctttgtttccagagcacata
ggcgtcattacctcgcccactggtgcagcagtacgagatattattacgacgattaagcga
agatacccaattgtacaggttacaatcataccagttctggttcaaggagaaagtgcagct
cgttctattgcagatgcagtcgatttagctaacaatttagatttatttgatacgttaatc
gtaggtcgaggcggcggttcaattgaggagttatgggcgtttaatgaagaaattgtggca
gaatccatttttcgttctaaaatcccgataatctctgctgttggccacgagacagatatt
acgataagtgattatgtagcagatttacgcgcaccaacaccgactggagctgctgagctt
gcagtacagtcacagattgaattaagggaaaagatagatacactaacaagatcactaacg
agagaattaacgaatgaaatgagaaatcatcagaggcatctggaacgcttaaaaggggct
tatgcttttcgatatccagaacagcttatcaagcaaaaggaacaggcacttgatagcttt
gtactgagcttacaaaaagagatgattgcaactaagaaagaaaaagaaacaagattatta
aatctttataaacgattaattactcagcatccacaaaagcaactcgagcaatctaaaatc
aagcttgatgaaaaaataaaatcgcaaaattattatatgactaaattacttgaaaataaa
tcgatacaacttacaaatacaattgataaattattcttagttaatccgctggagattatg
aaacgtggattttccttatcatacacggcagggaatgaaattattaaatcaactaatcaa
gtgaaagcaaatgattatattaaaattaaattaagcgatggtaaaataaattgccaggta
gtggaagtagaggaggaaagtaaatcatga
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