Oceanobacillus sp. 143: CV093_16905
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Entry
CV093_16905 CDS
T06339
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13530
AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
Organism
ocb
Oceanobacillus sp. 143
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocb03000
]
CV093_16905
03400 DNA repair and recombination proteins [BR:
ocb03400
]
CV093_16905
Transcription factors [BR:
ocb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CV093_16905
DNA repair and recombination proteins [BR:
ocb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CV093_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_24
UPF0122
HTH_5
MarR
MarR_2
Sigma70_r4
HTH_28
DUF4107
SpaA
HTH_IclR
HTH_20
HTH_38
HTH_11
AprA_N
Motif
Other DBs
NCBI-ProteinID:
QGS69362
LinkDB
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Position
3159264..3159629
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AA seq
121 aa
AA seq
DB search
MFEILFQTFIITFKETSDPTTFRILEYINQNYDQDLSLTDISKKFNLTEGYISRVLKKNA
NINFKKHLNNLKINKAKELLKKGNYKVNEVSALVGYKNVNTFIRTFKQQEGIPPGEFSKF
R
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaattctatttcaaacttttattatcacatttaaagaaacatcggatccaact
acatttcgtattttggaatatattaatcaaaactatgaccaagatctttcgttgacggat
atctctaaaaagtttaatttaacggaaggttatattagtagagtattaaagaagaatgct
aacattaattttaaaaaacatctcaataatttaaagattaataaagcaaaagagctgctt
aaaaaaggaaattacaaagtaaatgaagttagcgcattggttggttataagaatgtaaat
acttttatacgaacttttaagcagcaagaaggaataccaccaggagaattctctaaattt
cgttaa
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