Oceanobacillus sp. 143: CV093_18875
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Entry
CV093_18875 CDS
T06339
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ocb
Oceanobacillus sp. 143
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocb01011
]
CV093_18875 (spoIID)
Enzymes [BR:
ocb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CV093_18875 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
ocb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CV093_18875 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
YjfB_motility
Motif
Other DBs
NCBI-ProteinID:
QGS69599
LinkDB
All DBs
Position
complement(3556394..3557545)
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AA seq
383 aa
AA seq
DB search
MKSKNVARILELQKKRKQDASINRNKAKPIKRQIIPFTHRNTIHFNRGSRVWRAPTIIIL
ASLMMIILVIPTLVVVPFGNENKQEASSIDMEKKEEIEIEQSPLSIEVMRHATETVEDLP
LETYVAGVVAAEMPIEFELEALKAQALAARTFTVNHLLHGNRGSEYDLTDTVTHQVYKNE
LDLQKQWGSNFTANMNKIKEAVNATKGEIITYQDAPITAQFFSTSNGFTENSEDYWENEL
PYLRSVESPWDKESPKYLDQGTFSIDEVEAALQIELPRSVALNLEITRTESGRVKELAIE
GHTFSGREIRDKLKLRSNDFKIDQNNNHLVFTTKGNGHGVGMSQYGANGMAMEGKTYQEI
IKHYYQGVEINTVTDTAPTLVAK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atcaaatcaaaaaatgtcgcccgcatcttggaattacaaaagaagcggaaacaggatgct
agtataaataggaataaagccaaaccgattaaacggcaaataattccctttacgcatcga
aacactattcattttaacaggggaagcagggtgtggagagccccgacaatcatcattctc
gccagcttaatgatgattattctcgtaatcccaacattggttgtcgttccatttgggaat
gaaaataagcaggaggcaagcagtattgatatggagaaaaaagaggaaattgaaatagaa
cagtcgcctttatcaattgaagtaatgcggcatgccacggaaacggttgaagatctgcca
ttagaaacctatgttgcaggtgtagttgcagccgaaatgccaattgaatttgaactcgag
gctctgaaggcacaggccctcgctgcgagaacttttaccgttaatcacttgctgcatggg
aataggggatcggaatacgatttgactgacactgtcacacatcaggtttataaaaatgag
ctggatttgcaaaaacagtggggaagcaattttacagcgaatatgaataaaattaaagag
gctgtaaatgcaacgaagggtgaaattatcacgtatcaagatgcaccaataactgcgcag
tttttctcaacaagtaatggttttacagagaattctgaggactattgggaaaatgagctt
ccatatttacgcagtgtggagagcccttgggataaggaatcaccgaaatatctcgatcaa
ggaacgttttcaattgacgaggtagaggctgctctccaaatagaactacctagaagtgtt
gctctaaacttagaaataacacgtacagaaagtgggcgtgtcaaagaattagcgattgaa
ggccatacattttctggcagggaaattcgcgataagctaaaattacgatcgaatgacttc
aaaattgaccaaaataataatcacctagttttcacaaccaagggaaatgggcatggagtt
ggcatgagccaatatggtgcaaacggaatggctatggaaggaaaaacatatcaggaaata
ataaaacattactatcaaggtgttgaaataaatactgtaacagatacagcaccaaccctc
gttgcaaaataa
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