Oceanobacillus sp. 143: CV093_19790
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Entry
CV093_19790 CDS
T06339
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
ocb
Oceanobacillus sp. 143
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocb03000
]
CV093_19790
Transcription factors [BR:
ocb03000
]
Prokaryotic type
Helix-turn-helix
XRE family
CV093_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
DUF896
DUF5321
HTH_37
Phage_CI_repr
Sigma70_r4
DUF3226
Rrf2
MarR
WASH-7_mid
Motif
Other DBs
NCBI-ProteinID:
QGS69686
LinkDB
All DBs
Position
complement(3758738..3759088)
Genome browser
AA seq
116 aa
AA seq
DB search
MIGENIQRLRKSKGLTLSDCAERANISKSYLSNIERNLNQNPSIQIIEKLAVVLDVDLRT
LLGTAESVKEQVPESEWLEFVNELKKSGVEKEQLQEFRAVIEFIRWQKGKCGGSDK
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgataggggaaaatatccaaagacttcgtaaaagcaaagggctcacattatcggactgt
gccgaacgagcaaacatctcgaagtcttatttaagtaatattgaacgaaacttaaatcaa
aatccctcgatccaaataattgaaaagctagctgttgtgctcgatgtcgacctgcgaaca
ctacttggtacagcggaatccgtaaaagaacaagtgccagaaagtgagtggctagagttt
gtaaatgagttaaagaaatcgggggttgagaaggaacaattgcaagagttcagagcagta
attgaatttattaggtggcagaaggggaaatgtggagggagcgataaatga
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