Ochrobactrum sp. BTU1: KMS41_00100
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Entry
KMS41_00100 CDS
T09943
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03030
DNA replication
occ03430
Mismatch repair
occ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KMS41_00100
03430 Mismatch repair
KMS41_00100
03440 Homologous recombination
KMS41_00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
occ03032
]
KMS41_00100
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_00100
Enzymes [BR:
occ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KMS41_00100
DNA replication proteins [BR:
occ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KMS41_00100
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KMS41_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_14
AAA_5
AAA_18
AAA_19
TsaE
AAA_24
VapE-like_dom
SRP54
DUF815
AAA_2
CbiA
Rad17
ABC_tran
AAA_33
AAA_28
RNA_helicase
nSTAND3
SKI
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QWK77691
LinkDB
All DBs
Position
1:20981..22798
Genome browser
AA seq
605 aa
AA seq
DB search
MDTKSETGAYRVLARKYRPQNFNDLIGQEPMVRTLKNAFETGRIAQAWMLTGVRGVGKTT
TARILARALNYKTDSIDQPTIDLSVMGEHCQAIMEGRHVDVIEMDAASHTGIDDIREIIE
QVRYRPVSARYKVYIIDEVHMLSNQAFNGLLKTLEEPPPHVKFIFATTEIRKVPITVLSR
CQRFDLRRIESGTLAAHLRRIAEAEAIEVDDTSLAMIARAGEGSARDSLSIFDQAIAHGA
GHVSAEAVRSMLGLADRARIIDLFEMIMRGDVAGALTEFRAQYDVGADPSVVLTDLADFN
HLVTRLRFTPDVAEDVSLSEDERVRGRDFSQKLSVRVLSRTWQMLLKGIAEVDTATRPVQ
AAEMLLIRLAHAADLPTLDEALRGLENGSVSAPRPQSPSGARPNGGSQPEARGSVDAVSA
STMMPASGGPATAMRLVETQPQPVQPPAPQQFVDSTPQPSVQINSLNDIVALADKFRDMQ
FKILVKNCVRLSSIAAGRLEIGLTDDAPKSLPSDISQRLHNWTGIRWVVTVARDVSGQTV
AEAETERRDNLVTDARADPDVAAILAAFPGAKITDVRIAVAEQGDDDDIDLDTVEDVPGA
PSDDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaatccgaaactggcgcttatcgcgttctcgcccgcaagtatcgcccccag
aatttcaatgatctgatcggccaggagccgatggtccgcacgctgaaaaacgcgttcgag
accggtcgtatcgcgcaggcatggatgctgactggtgttcgcggtgtgggcaaaaccaca
actgcgcgtattctggcgcgcgcgcttaattacaagaccgattctatcgatcagccgaca
attgatctctccgtaatgggtgagcattgtcaggcgatcatggaaggccgccatgtcgat
gtcatcgaaatggatgcggcttcgcatacaggtatcgatgatattcgcgaaatcatcgag
caggtgcgctatcgccctgtttcggcgcgctacaaagtttacatcatcgacgaagtgcac
atgctgtccaatcaagccttcaatggcctgttgaagacgcttgaagagccgccgccgcat
gtgaaatttatcttcgccaccaccgaaatccgcaaggttccgatcacagttctgtcgcgc
tgtcagcgttttgatctgcgtcgcatcgaatcgggtacgttggctgcacatctgcgccgg
attgccgaagctgaagcaatcgaagtcgatgacacatcgcttgcgatgattgcgcgcgcg
ggcgaggggtccgcacgcgattcgctctccatttttgatcaggccatcgcgcatggcgcg
ggtcatgtttcggcggaagccgtgcgttcaatgctcggtcttgcagaccgcgcgcgcatt
atcgatctctttgagatgatcatgcgtggggacgttgctggtgctttgaccgaatttcgt
gcgcaatatgatgtcggagccgacccatcggtcgtgcttactgatttggccgatttcaat
catctggtgacacgtctacggtttacgccggatgtggcggaagatgtatcgctctcggaa
gatgagcgcgttcgcggtcgcgatttttcgcagaagctttcggtgcgcgtgctgtctcgg
acatggcaaatgctgcttaagggcattgcagaagtggatacggcaacgcggcctgtgcag
gccgcagaaatgctgctgatccgtctggcccatgccgctgatctgccaacgcttgatgaa
gcactgcgtggacttgaaaatggctctgtttcggctccgcgtccgcaatctccaagcggc
gcaaggccaaatggcggttcgcagccagaagcgcgcggcagtgttgatgcggtttccgcc
tcaaccatgatgcctgcatcgggtggtcctgcaacagccatgcgtctggtggaaacacag
ccgcagccggttcaaccgcccgcaccacagcagtttgtcgatagcacaccacagccttcg
gttcagatcaacagcctcaatgatatcgttgcgctggctgataagtttcgcgacatgcag
ttcaagattctggtcaagaactgcgtgcgcctgtcctccatcgctgccggaaggcttgag
attggtctgaccgacgatgcaccgaaatcgctgccgagcgatatttcgcagcgcctgcac
aactggaccggcattcgctgggtcgtgacagttgcgcgtgacgtttctgggcaaactgtt
gcagaagctgaaaccgagcgtcgcgataacctcgtgaccgatgcgcgcgctgatcccgat
gttgctgcaattcttgcagcttttccgggcgcaaagataacagatgtccgcattgccgtt
gcagaacagggcgatgatgacgatatagaccttgatactgtcgaagacgtgcccggcgcg
ccttctgacgatgattga
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