Ochrobactrum sp. BTU1: KMS41_00430
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Entry
KMS41_00430 CDS
T09943
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
occ03016
]
KMS41_00430 (thpR)
Enzymes [BR:
occ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KMS41_00430 (thpR)
Transfer RNA biogenesis [BR:
occ03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KMS41_00430 (thpR)
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Gene cluster
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QWK77751
LinkDB
All DBs
Position
1:complement(90134..90724)
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AA seq
196 aa
AA seq
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MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHITLRFIGDVEGHVADEVANALDR
VRRPEFMLNLSGVDAFGSKKPHSIYAGVSPSPELNALQGEIERICQRLRIPADPRKFTPH
VTLARLRNPHIADVVHYLSSRGNFSTMPFKVGRFVLMSSRDSVGGGPYVVEEAWPLMAVS
RQNWSASAFDEARTIR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctctttactgccctcgaaatcccgcgcgacgccgcgctttcgctctcgtta
ttacgaggcggcctccccggcgcacgctggattgatgtcgaaaattaccacataaccctg
cgttttatcggggatgtggaaggccatgtggccgacgaggttgccaatgcgcttgatcgc
gtgcggcgccccgaattcatgctcaacctgtcaggtgtcgatgctttcggttccaagaag
ccgcacagcatctatgcgggcgtatccccctcgcctgaactcaacgcattgcaaggcgaa
atcgaacgcatttgccagcggcttcgcattcccgccgatccgcgtaaattcacaccccat
gtgactttggcacggctgcgaaatccgcacattgcggatgtcgtgcattatctctcatca
agaggtaatttctcaacaatgccgttcaaggtgggccgcttcgtgctgatgtcctcacgc
gattctgtcggcggcggaccttatgtcgtcgaggaagcctggcctttgatggccgtttca
cgccagaactggtcggcaagcgcctttgatgaggctagaaccatccggtaa
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