Ochrobactrum sp. BTU1: KMS41_00615
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Entry
KMS41_00615 CDS
T09943
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03030
DNA replication
occ03410
Base excision repair
occ03420
Nucleotide excision repair
occ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KMS41_00615 (polA)
03410 Base excision repair
KMS41_00615 (polA)
03420 Nucleotide excision repair
KMS41_00615 (polA)
03440 Homologous recombination
KMS41_00615 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
occ03032
]
KMS41_00615 (polA)
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_00615 (polA)
Enzymes [BR:
occ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KMS41_00615 (polA)
DNA replication proteins [BR:
occ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KMS41_00615 (polA)
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KMS41_00615 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KMS41_00615 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DprA_N
HHH
IMS_HHH
ZapD
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QWK77785
LinkDB
All DBs
Position
1:136359..139301
Genome browser
AA seq
980 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKTDGLPVGAVSGFCNMLWKLLKDARSTDVGVV
PTHFAVIFDYSSQTFRKEIYPEYKANRTAPPEDLIPQFGLIRQATRAFNLPCIEKEGFEA
DDLIATYARIAEKAGGDVTIISSDKDLMQLVTPSVSMYDSMKDKQISIPEVIEKWGVPPE
KMIDLQSLTGDSTDNVPGIPGIGPKTAAQLLEEFGDLDTLLARASEIKQNKRRENIIAFA
DQTKIARELVTLKTDVPLDVDLSGLVLEPQNGPKLIGFLKAMEFTTLTRRVAEATDTDAS
AVEPCHIETEWGSGAHGPDVDVPAKSEAKLSENSSTTAAVETQDASGYTPKALAVSRAAT
ALAQKIDTTAYTCIRDLPTLNKWLAEAVETGLVAFDTETNSLDPMQAELIGFSLALAPGK
AAYIPLQHKSGAGDLLGGGMVEGQIPLDKALAALKTVLEDKSVLKIAQNMKYDWLVMRRH
GINTVSFDDTMLISYVLDAGTGGHGMDPLSERWLGHTPIAYKDVAGSGKSAVTFDMVDID
RATAYAAEDADVTLRLWQVLKPRLAAEGLASVYERLERPLVDVLARMEERGISVDRQVLS
RLSGDLAQSAARYEDEIYELAGEKFNIGSPKQLGDILFGKMGLPGASKTKTGQWSTSAQV
LEDLAAEGLPLPRKIVDWRQLTKLKSTYTDALPGYIHPQTKRVHTSYAMASTSTGRLSSS
EPNLQNIPVRTAEGRKIRTAFIAEPGNKLISADYSQIELRVLAHVADIPQLKQAFADGID
IHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIPREEAGQYIRTYF
ERFPGIKDYMEATKAFAREHGYVETIFGRRAHYPDIRASNPQVRAFNERAAINAPIQGSA
ADVIRRAMIRMENALADEKLAARMLLQVHDELIFEVPENEVEKTIPIVRHVMENAAMPAV
ALSVPLQVDARAAHNWDEAH
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggctcgggctatattttccgcgcctat
catgccctgccaccgctgacccgtaagacggacggcttgccggtcggggccgtgtctggt
ttctgcaacatgctgtggaagctgttgaaggatgcgcgcagcaccgatgtcggtgtggtg
ccaacgcattttgcggtcattttcgattattcgtcgcagaccttccgcaaggaaatctac
cccgaatataaggccaaccgcaccgcgccgccggaagatctgatcccgcaattcggcctg
atccgtcaggcaacgcgtgccttcaatctgccttgcatcgaaaaggaaggttttgaggcc
gacgatctgatcgcgacctatgcccgtattgctgagaaagcaggcggcgatgttacaatc
atttcgtccgacaaggacctcatgcagctcgtcacaccgagcgtgtccatgtatgacagc
atgaaggataagcagatttcgatcccggaagtgatcgaaaaatggggtgtcccgccggaa
aaaatgatcgacctgcaatcgctgaccggcgacagtaccgataatgttccgggcattccg
ggcatcggcccgaagaccgctgcgcaattgctggaagagtttggcgatcttgatacgttg
ctcgcgcgcgcttccgagatcaagcagaacaaacgccgcgaaaacatcatcgcctttgcc
gatcaaaccaagatcgcgcgtgagcttgtcacgctcaagactgacgtgccgctcgatgtc
gatctcagtggtctcgtgcttgaaccacagaatggtcccaagcttattggcttcctgaaa
gccatggagtttacaacactcacccgtcgcgtggctgaagcaacggatacggatgcgtcg
gctgttgaaccgtgccatatcgaaaccgagtggggttctggggcacatggtccggatgtc
gatgtaccggcaaaatcagaagccaagctgtctgaaaactcttccaccaccgctgcggtt
gagacgcaagatgcaagtggctacacgccgaaagcgctggctgtaagccgagcagcgacg
gcgcttgcacagaagatcgacaccacggcctatacctgcattcgcgatcttccgacgctg
aataagtggctcgcagaggctgtcgagactggccttgtcgctttcgataccgaaaccaat
tcgcttgatccgatgcaggccgaactgatcggtttctcgctggcgcttgcgcccggtaaa
gccgcctatatcccgctccagcacaaatccggcgcaggcgatctgcttggtggcggcatg
gttgaaggtcagataccgctcgataaggcgctggcagctttgaagaccgttcttgaggac
aaatccgttctcaaaatcgcacagaacatgaaatatgactggctggtcatgcgccgtcac
ggcatcaacaccgtgtcttttgatgatacgatgctgatttcctatgtgttggatgcgggc
accggcggtcatggcatggacccgttgtccgagcgttggttgggccatacgccaatcgct
tataaggatgtggcgggcagcggcaaaagcgctgttacctttgatatggtcgatattgat
cgtgcgacagcctatgctgcagaagacgctgatgtcacgttgcgtctatggcaggtgctg
aagccgcgtctggccgcagaaggattggcctcggtttatgagcgtcttgaacgtccgttg
gtcgatgtgcttgcccgcatggaagagcgcggcatctcggttgaccgtcaggttctctcg
cgcctgtcgggtgatctcgcacaatctgctgcacgctatgaagacgaaatttacgaactt
gccggtgaaaaattcaatatcggctcgcccaagcagcttggcgatattctttttggcaag
atgggtttgccgggtgcatccaagactaaaaccggtcaatggtcgacctctgcgcaagtg
ctggaagatctggctgctgaaggtctgcctttgccgcgcaagattgttgactggcgccag
ctgacgaagctcaaatccacctacacggatgcgctgccgggatatattcacccgcagaca
aagcgcgtgcatacgtcttatgcaatggcgtccacctcgaccggacgcttgtcttcatct
gagccgaacctgcagaatattccggttcgtacagccgaaggccgcaagatcagaacggct
tttattgcagaaccgggcaacaagcttatctctgccgattacagccagatcgaattgcgt
gtgctggcacatgtcgccgatattccgcagctgaaacaagcttttgccgatggcattgat
attcatgccatgaccgcttctgaaatgttcggtgtgccggttgaaggtatgccgtccgaa
gtgcgccgccgtgccaaggcgatcaatttcggtatcatctacggcatttcggcttttggt
cttgccaaccagctttccattccgcgtgaagaagcagggcaatatatccgcacctatttc
gaacgcttccccggcatcaaagactatatggaagcgaccaaggctttcgcgcgcgaacat
ggctatgtcgaaacgattttcggccgtcgggcgcactatcctgatattcgggcttccaat
ccgcaggtgcgcgccttcaatgaacgggcggcaatcaatgcacctattcagggttcggct
gccgatgtcattcgccgggccatgatccgtatggaaaatgcactggcagatgagaagctt
gcagcccgtatgcttttgcaagtccacgatgaattgatctttgaagtacctgaaaacgag
gtcgaaaagacaattcctatcgtgcgccatgttatggaaaatgcggccatgcctgcagtg
gcgctttctgtgccattacaggtggatgcaagggctgcacataactgggatgaggcgcat
taa
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