Ochrobactrum sp. BTU1: KMS41_00765
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Entry
KMS41_00765 CDS
T09943
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
occ03032
]
KMS41_00765
03036 Chromosome and associated proteins [BR:
occ03036
]
KMS41_00765
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_00765
DNA replication proteins [BR:
occ03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KMS41_00765
Chromosome and associated proteins [BR:
occ03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KMS41_00765
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KMS41_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QWK77813
LinkDB
All DBs
Position
1:complement(174038..174322)
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AA seq
94 aa
AA seq
DB search
MIKSELVQVIASRNPHLFQRDVENIVGAVFEEITNALADGNRVELRGFGAFSVKNRPARS
GRNPRTGDTVDVEEKWVPFFKTGKELRDRLNGAI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatcggaactcgttcaggttatcgccagccgtaatccgcatcttttccagcgc
gatgtcgaaaacatcgtcggcgcggtttttgaagagatcaccaatgcccttgctgatggc
aaccgcgtcgaattgcgcggctttggcgctttctcggtaaaaaatcgcccggcccgcagc
ggccgcaatccacgtaccggcgatacggtggatgttgaagaaaagtgggtgccattcttc
aagactggcaaggaactgcgtgaccgcctcaacggcgccatctga
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