Ochrobactrum sp. BTU1: KMS41_03080
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Entry
KMS41_03080 CDS
T09943
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
occ01011
]
KMS41_03080
Enzymes [BR:
occ01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
KMS41_03080
Peptidoglycan biosynthesis and degradation proteins [BR:
occ01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
KMS41_03080
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Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_19
AAA_25
Phage_P2_GpU
TPR_12
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QWK78755
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Position
1:complement(647263..649326)
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AA seq
687 aa
AA seq
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MGAAYAQSSLPTEVPTPLARPFASTATHESPINLVTPKPRPAAAPDPVITSSFSRVENPA
AIGGTLKSGLDALYSRDITGAIAYRNGMPKGSLDRQILTWSIATSGLDGVPSAEIAMAAS
ELPGWPGMSALRRNSERALAKENASASTVIATFGTTRPQTTEGMIVLARAYVASGNSTKA
RQLLAPWWATERLSADDEAKILKEFGSVLSRDDHQRRLLRSLYNDRMQSAKLLSGPAQAQ
SLYNAYAALAQKSPNTAKAIADVDRSWHSNPAYMFLQIRFLRRADRFSEATDLMLKAPKD
AASLVDPDAWWVERRILSRELLDINKPQLAYRLAAAHAAESPTMAAEAEFHAGWYALRAL
KQPKLAAPHFAKIAEISSRPISASRAYYWLGRASEAGAGGDAQGYYRRSAHFGTTFYGQL
SAAKLNEKAPELAYPRPTDAERVRFSGRPAVQAIKRLEQIGYGNRATSLYTQLSQELGSV
GELALLAVMAEKNENHYLALRVGKAAAFRGLDVGALSHPIGAIPAHANISGSGKALAYAI
ARQESEFNISAVSKAGARGLLQLMPETARSVATRNGMAFSAPKLTTDAAYNATLGAHFLG
EQLDRFNGSYVLTFAGYNAGPRRASDWVAKYGDPRGKPIEEVVDWIERIPFSETRNYVQR
VMENYEVYKARLTGSADIRTDLIYGRR
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgcatatgcccaatcatctttgccaacggaggttcccacgccgctggcacgc
ccctttgcgtcaaccgctacacatgaatctccaatcaatctggttacccctaagcctcgt
cctgctgcggcaccagacccggttattacctcctcctttagtcgcgtagaaaaccctgca
gcaattggcggaacgctaaaaagcggtctcgatgcgctttattcccgggacattacgggg
gcaattgcctaccgcaatggaatgcccaagggctcgcttgatcgccagattctgacatgg
tcgatcgcgacatccggattggacggcgttcctagcgctgagatcgcaatggcagcatca
gagttgccaggctggccaggcatgtcggccttacgccgtaactcagaacgcgcacttgca
aaagaaaacgcttcggcttcaacggtcattgctacatttggtacaacacgtcctcagaca
actgagggcatgattgttcttgcacgcgcctatgtagctagcggaaacagtaccaaggcg
cgccagttgctagcgccatggtgggcaacagagcgtctttctgcagatgatgaagcgaaa
attctgaaggaatttggcagcgttctgagccgagacgaccatcagcgtcgtcttctgcgc
tcgctttataatgatcgcatgcagtcggccaagcttctatctggccccgcacaggcacaa
tcactttataacgcttacgcagcgcttgcgcaaaaatcgccgaatacggcaaaagccatt
gccgatgttgatcggtcttggcactcaaaccctgcctatatgttcctgcagattcgtttt
ctgcggcgtgcagatcgctttagcgaagcaacagacctgatgctgaaagcgccaaaagat
gcagcatcgctcgttgatccagacgcgtggtgggtcgagcgacgcattctatcgcgcgaa
cttctcgatattaacaagcctcagctcgcctatcgacttgcagcagcacatgctgccgaa
tcgcccactatggcagccgaagccgagtttcatgcgggttggtatgcattgcgtgcactc
aagcagccaaagcttgcggccccgcattttgccaagattgcagagatttcctcccgtcca
atttccgcctcccgtgcctattactggttgggtcgcgcatcagaagctggagctggcggc
gatgcacagggctattatcgacgttctgcacatttcggcaccacgttctacggtcagctt
tctgccgcaaagctcaatgagaaggcgcctgagctagcgtatccgagaccaacagatgcc
gagcgtgtgcgtttctctggtcgccctgcagtgcaggcgatcaagcgtcttgagcagatt
ggttatggaaatcgcgcaacctcactttatacgcagctctcacaagagctcgggagcgtt
ggtgaactcgcccttctcgctgtgatggcagagaaaaacgagaatcattatctagctctg
cgtgttggtaaagctgctgcattccgtggattggatgtcggcgcgctatcgcacccgatt
ggtgccattccagcacatgcgaatatcagcggctctggcaaagcgcttgcctatgcgatc
gcgcgtcaggaaagcgaattcaacatcagtgcagtttcgaaagctggtgcgcgcggtctg
ttacaattgatgccagaaacggcgagaagcgtagcgacacgcaatgggatggctttctct
gcaccgaagctcacaaccgacgccgcttataatgcgacactgggcgcgcattttctaggc
gaacagctcgatcggttcaacggatcctatgtgctgacttttgccggttataatgctggc
cctcgtcgtgcatccgattgggttgcaaaatatggcgatccgcgcggtaaaccgattgaa
gaagttgtcgattggatcgagcgaattccgttttccgaaacgcgaaactatgtgcagcgt
gtgatggaaaactatgaggtttataaagctcgcctcaccggcagcgccgatatccgaact
gacctgatttatggccgacgttga
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