Ochrobactrum sp. BTU1: KMS41_03150
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Entry
KMS41_03150 CDS
T09943
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KMS41_03150 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
occ03019
]
KMS41_03150 (rnc)
03009 Ribosome biogenesis [BR:
occ03009
]
KMS41_03150 (rnc)
03036 Chromosome and associated proteins [BR:
occ03036
]
KMS41_03150 (rnc)
Enzymes [BR:
occ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KMS41_03150 (rnc)
Messenger RNA biogenesis [BR:
occ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KMS41_03150 (rnc)
Ribosome biogenesis [BR:
occ03009
]
Eukaryotic type
90S particles
RNase
KMS41_03150 (rnc)
Prokaryotic type
rRNA processing factors
KMS41_03150 (rnc)
Chromosome and associated proteins [BR:
occ03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KMS41_03150 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DUF6098
Motif
Other DBs
NCBI-ProteinID:
QWK78256
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All DBs
Position
1:662990..663694
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AA seq
234 aa
AA seq
DB search
MVSANKAAEILEARTGYRFQNLKRLERALTHSSVQAPSRANYERLEFLGDRVLGLVVAQM
LFEAFPEAPEGELSVRLNALVNAETCAAIADEIGLADLIHTGSDIKSLNDKRLLNVRADV
VEALIATMYLDGGLEAARGFIKRYWQERSLETGAARRDAKTELQEWAHQQGNVHPSYSIL
SRSGPDHDPLFTVEVTVKGFAPETGEGRSKRIAEQSAAEAMLYRESVWKRDTSG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgcgaataaagcagcagaaattctggaggcgcgcacaggataccgttttcaa
aatctgaaacggcttgaacgtgcgctcacccattcaagtgtccaggcaccatcccgtgct
aattatgaacgccttgagtttcttggcgaccgcgtgcttggtctcgtggttgcccaaatg
ctttttgaagcatttccagaggctccagaaggcgaattgtcggtgcgcctcaatgcgctg
gtcaatgcggaaacctgtgccgcgattgcggacgaaatcgggcttgccgatctcatccac
acaggttccgacattaaatcgctcaatgataagcgcttgttgaatgtgcgagcggatgtt
gtcgaagcactgatcgccacgatgtatcttgatggagggctggaggctgcgcgcggcttc
ataaagcgctactggcaggagcgttcgcttgagaccggagcagctcgccgtgatgccaag
actgagttgcaggaatgggcgcatcagcaaggcaatgtacatccatcttacagcattttg
agccgcagtgggccggaccacgacccgcttttcaccgttgaagtgacagtgaaaggattt
gcacccgaaacgggtgaaggtagatccaagcggattgctgagcaaagcgctgcagaagcg
atgctttatagggaatctgtctggaaacgcgacacttccggctaa
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