Ochrobactrum sp. BTU1: KMS41_04195
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Entry
KMS41_04195 CDS
T09943
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KMS41_04195 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_04195 (xth)
Enzymes [BR:
occ01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KMS41_04195 (xth)
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KMS41_04195 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QWK78767
LinkDB
All DBs
Position
1:complement(867405..868187)
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AA seq
260 aa
AA seq
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MKIATWNINGVKARIENLQHWLKESSPDIACLQEIKSVDELFPRLEIEALGYHVETHGQK
GFNGVAILSKKSPDEVNRGLPGDDSDEQARFIEAVFSTDKGVLRVVSLYLPNGNPIDTEK
FPYKLSWMQRLEAWAKDRLELEEPLVLAGDYNVIPEPNDAKNPQQWLGDALFQPQSRQAF
RRLENLGFTEAVRASTDEDGVYTFWDYQAGAWQKNNGIRIDHLMLSPEAANHFVAADIEK
HVRAWEKPSDHVPVTVTLAV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcgacatggaacattaatggcgtcaaggcgcgtatcgaaaacctccagcat
tggctgaaggagtcgtcgcctgacattgcttgccttcaggaaatcaagtcggtggacgaa
ctgttcccacggctggagattgaagcgctcggctatcatgtggaaacgcacggccagaaa
ggcttcaacggcgttgcgattctgtccaagaagtcgcctgacgaggttaatcgtggcttg
ccgggcgacgatagcgatgaacaagcgcgctttatcgaggcggtattctcgacagataag
ggcgttctccgtgtggtctcgctctatttgccaaacggcaatccgatcgacacagaaaaa
tttccatacaagctttcttggatgcagcgccttgaagcatgggccaaagacaggcttgag
ctcgaagaaccgctagtacttgccggtgactataacgtcattccagagccaaacgatgcg
aagaacccgcagcagtggctgggcgatgcgctgtttcaacctcaatcacgtcaggcgttt
cgccgacttgaaaatctgggtttcacggaagctgtgcgcgcttcaactgatgaagatggc
gtctatacgttctgggattatcaggcgggagcctggcagaaaaataatggcattcgcatc
gaccatctgatgctctcaccagaagcggccaaccattttgttgctgcggatatagagaag
cacgtcagagcgtgggaaaagccgtccgaccatgttccggtcacagtcacattggcggtg
taa
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