Ochrobactrum sp. BTU1: KMS41_04595
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Entry
KMS41_04595 CDS
T09943
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
occ01002
]
KMS41_04595
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
occ01011
]
KMS41_04595
Peptidases and inhibitors [BR:
occ01002
]
Cysteine peptidases
Family C82
KMS41_04595
Peptidoglycan biosynthesis and degradation proteins [BR:
occ01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KMS41_04595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF366
Motif
Other DBs
NCBI-ProteinID:
QWK78517
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All DBs
Position
1:955651..957645
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AA seq
664 aa
AA seq
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MQFSRNLNRNIKDNRKRGPYVRNAMAFALAASTLFSTAQAQAANSLLELFQQRRQQQAQP
VQPPVQVAPAPNTAKPVSVPRAAVPPAQRVTVKGPQIYNYKPDALIKVDFSALDMQVTAA
VDPARVDPLTSGMSPFGPVNKTDESQGELAFDAATDYLKTVDVKAEKQIAEAIVSFYSEK
RTFLWSADNKALDKARNVAAFFAQADDDGLNPEEYAVAIPGDHFEEAQLAERQQKLADFE
IRMSARALRYAIDAGEGRVIADRLSGFYDLPRNRVDPKAVLARLASETDPVTYLKSFQPN
NEAYASLKRELANTDAPAGEPIRISLDKAIRPGDSSDQLANVVALITRHAPASYLEQHRN
VLQAHADGSIYDPELAAAIKDYQKLSGSTPDGIIGKNTIAALQGEQDSVKRDRILYSMER
LRWLPHDFGSRYVMVNQPSYRAEYFEDGKEKLAMNVVIGSPTHQTYFFYNKVQMVVFNPS
WGVPRSIILNEMLPKVMRDTSYLDRNGYEVYVGGKKVSASAVNWSAVAAGKAHVGIRQKP
SLDNALGELKILFPNAHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVLGKPVE
ELSKYFGKDERGLKVANPVPVYIAYFTAWPDANGNVRYFSDVYDRDAGMQKAFDKTAESR
MAAL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccagaaatttgaatcggaacattaaagataatcgcaagcgcggtccttat
gtccgtaacgcgatggctttcgcactggcagcatcgacacttttctcgacagcgcaggcg
caggcagctaactctctgcttgagctgttccagcagcgtcgtcagcaacaggcccagccg
gttcagccgcctgtgcaggtcgcaccagcaccaaatactgctaagccagtttccgtgcct
cgagctgccgtgccgccagcacagcgcgtcacggttaaaggaccgcagatctacaattat
aagccggatgctttgatcaaggtcgatttcagcgctcttgatatgcaggtgacagcggca
gttgatcccgcgcgcgtcgatcctctgacatcaggaatgtcgccgtttggtccggtaaac
aagaccgacgaatctcagggtgagctcgctttcgatgccgcaacggattatctgaagacc
gtcgatgtcaaagcggaaaagcaaattgctgaagctattgtcagcttctattccgaaaag
cgcacttttctttggtcggcagacaacaaggcgcttgataaagcccgcaatgttgcagcc
ttctttgctcaggctgacgatgatggtctgaacccggaagaatacgccgtcgctattcct
ggcgatcatttcgaagaagcacagcttgccgaacgtcagcagaaacttgctgactttgaa
attcgcatgtctgcgcgtgcattgcgctatgcaattgatgcgggcgagggccgtgtgatt
gcagaccgcctcagtggtttttatgatctgccgcgtaatcgcgtcgatcctaaagccgtt
ctggcccgtctggcatctgaaaccgacccggttacttatctgaaaagcttccagccgaac
aacgaagcctatgcttcattgaagcgtgaactggctaatacggacgcgccagctggcgaa
cctattcgcatttcgcttgataaagctattcgtccgggtgattccagcgatcagcttgca
aatgttgtcgcgcttattacgagacacgctccagccagttatctggaacagcatcgcaat
gttctgcaggctcatgcagatggaagcatctatgatccagaactggccgctgccatcaag
gattaccagaagctttcaggcagcacacccgatggcattattggtaagaacacgattgca
gcccttcaaggcgagcaggattcggtcaagcgtgatcgcattctctattcgatggagcgc
ctgcgctggctgccacatgatttcggctcgcgttacgtgatggtcaatcagccatcctac
cgagctgaatattttgaagacggcaaagaaaagctggccatgaatgtggtcatcggttcg
ccaacccatcagacctatttcttctataacaaggtccagatggttgttttcaatccatcc
tggggcgtgccgcgttcgattattctgaacgaaatgctgccaaaggtgatgcgtgatacg
agctatctcgatcgcaacggctacgaagtttatgtcggcggcaagaaggtttcggcgagc
gctgtgaactggagtgcagttgctgcaggcaaggcgcatgtcggcatccgccagaagcct
agtctcgataatgctctgggcgaactgaagattcttttcccgaacgctcacgacatttac
atgcatgacactccggcgaaatcctatttcagccgcgatatgcgtgccttgagtcatggc
tgcatccgtctggagcgcccgcgtgatatggcagcagcagttcttggtaagccggttgaa
gagctgagcaaatatttcggtaaggacgaacgcggcttgaaggttgcaaatccggttccg
gtctatatcgcttacttcacggcttggcctgatgccaacggtaacgttcgttacttcagc
gacgtttacgaccgtgatgcgggtatgcagaaagctttcgataagacggcagagtcacgc
atggccgctctttga
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