Ochrobactrum sp. BTU1: KMS41_05435
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Entry
KMS41_05435 CDS
T09943
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
occ03032
]
KMS41_05435 (gyrA)
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_05435 (gyrA)
Enzymes [BR:
occ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KMS41_05435 (gyrA)
DNA replication proteins [BR:
occ03032
]
Prokaryotic type
DNA Topoisomerases
KMS41_05435 (gyrA)
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KMS41_05435 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QWK78784
LinkDB
All DBs
Position
1:complement(1123984..1126758)
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AA seq
924 aa
AA seq
DB search
MDGGPSGPTGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILHAMNEMNL
AYNRPYRKSAGVIGEVMGKYHPHGDSSIYDALVRMAQDFSLRDPLVDGQGNFGSIDGDPP
AAMRYTECRLEKVTESLLSDIDKDTVDFQDNYDGREREPMVLPARFPNLLVNGSGGIAVG
MATNIPPHNLGEVIDGCVALIDNPALELEEVMEIIPGPDFPTGGIILGRAGINSAYSTGR
GSVIMRGRVAIEPMRGDREAIIITEIPYQVNKASMIEKMAELVRDKRIEGISDLRDESDR
DGYRVVVELKRDAVADVVLNQLYRYTPLQTSFGCNMVALNGGKPEQLNLLDMLRAFVAFR
EEVVTRRTKFLLNKARDRAHVLVGLAIAVANIDEIIALIRRAPDPATAREQLMERRWPAA
DVAPLIRLIDDPRHAINDDNTYNLSEEQARAILDLRLQRLTALGRDEVADELNKIGEEIR
DYLEILGSRIRVMTIVKEEMIAVRDEFATPRRTEFGLGGAEMDDEDLIAREDMVVTVSHA
GYIKRVPLATYRAQRRGGKGRSGMATKDEDFVTRLFVANTHTPVLFFSSRGIVYKEKVWR
LPVGNPQSRGKALINMLPLQQGERITTIMPLPEDEESWANLDVMFSTTRGTVRRNKLSDF
VQVNRNGKIAMKLEDEGDEILSVDTCTEFDDVLLTCAGGQCIRFPVTDVRVFAGRNSIGV
RGINLAEGDKVISMAILHHVDADASQRAAYLKRSIAERRAQGADDADDIVVVGEEVAVEA
DLSEELYQELKAREQTVLTVSEYGYGKRSSSYEFRVSGRGGKGIRATDTSKTDEIGKLVA
LFPVEASDQILLVSDGGQLIRVPVGGIRIAGRSTKGVTIFNTADGEKVVSVERISETESD
EENGAAEVDETAAEGDAPAAGGEE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatggcggcccaagcggccctacaggtatcgaaccgatttccattattgaggagatg
cagcgctcctatctcgattacgcaatgagcgttatcgtgagccgtgctctgcctgatgtg
cgcgacggcttgaagcccgtacatcgccgtattctccacgccatgaacgagatgaacctc
gcttacaatcgcccctaccgaaagtcggcaggtgtgatcggtgaagtgatgggtaaatac
catccacacggcgactcttctatttatgacgccttggtgcgcatggcgcaggacttctcc
ttgcgcgatccacttgtggacggacagggcaatttcggttccatcgatggcgatccgcca
gcggcgatgcgttataccgaatgccgtctggaaaaagtcaccgaatcccttctgtcggat
atcgacaaggatacggttgattttcaggacaactatgatggccgcgagcgggaacctatg
gttctgcctgcccgctttccaaacctgcttgtcaatggttcgggcggtattgcggttggt
atggcaaccaatattccgccgcacaatcttggcgaagtcattgatggttgcgtagcgctg
atcgacaatccggctcttgagctggaagaagtcatggaaatcattcctggtccggatttc
ccgaccggtggtattatccttgggcgtgccggcatcaactcggcctacagcacgggtcgc
ggttccgttattatgcgtggtcgcgtggcgatagagccaatgcgcggcgaccgtgaagct
attatcatcaccgagataccgtatcaggtgaacaaggcttcgatgatcgagaaaatggcc
gaactggtgcgcgacaagcgtatcgagggcatttctgatctgcgcgatgaatcggaccgc
gatggctatcgcgttgtagtcgagctcaagcgcgatgctgttgccgatgtcgtgctgaac
cagctttatcgctacacgccgctgcagacctcgtttggctgcaacatggtggcgctgaat
ggtggcaagccggaacagctcaatcttctcgacatgctgcgcgctttcgtggcgttccgc
gaagaagtggtaacgcgccgcaccaagttcctgctcaataaggcgcgtgatcgcgcgcat
gtgttggttggtcttgcgattgcagttgccaatattgacgagattatcgctctcattcgt
cgtgcgccagatccggcgaccgcgcgtgagcagttgatggaacgtcgttggcctgccgcc
gatgtggcaccgctgatccgtcttatcgatgatccgcgtcatgcgatcaacgatgataac
acgtataacctctcggaagagcaggcgcgtgctattcttgatcttcgcttgcagcgcctg
acagcacttggccgcgatgaagttgcggacgagctgaataagatcggcgaagaaatccgc
gattatctggagattcttggctcgcgcattcgcgttatgacaatcgtcaaggaagagatg
attgctgttcgtgacgagttcgctacgccgcgccgtaccgagtttggtcttggcggcgcc
gaaatggacgatgaagacctcatcgctcgcgaagatatggtcgtcaccgtcagccatgcc
ggttatatcaagcgtgtaccgctggcgacctatcgtgcgcagcgtcgtggcggcaaaggc
cgctccggcatggcaacgaaggacgaggatttcgtaacccgtctgttcgtcgccaatacg
catacgccggtgctgttcttctcctcgcgcggcatcgtctacaaggaaaaagtctggcgt
ctgccagtgggtaatccgcagtcgcgcggcaaggcactcatcaatatgctgccattgcag
cagggcgagcgcattaccacgatcatgccgctgccggaggatgaagaatcctgggcaaac
ctcgacgtcatgttctcgaccacgcgcggtacggttcgccgtaacaagctgtcggacttc
gttcaggtcaaccgcaacggcaagatcgcgatgaagctcgaagacgagggcgatgaaatc
ctctcggtcgatacctgtacggaattcgacgacgtgcttctgacctgtgctggtggccag
tgcattcgcttccctgtcacggatgttcgcgtctttgctggtcgtaactcgatcggcgta
cgcggtatcaatctggcggaaggcgataaggtcatctcgatggcaattctgcatcacgtt
gatgcagacgcttcgcagcgtgccgcttatctcaagcgctcgattgctgaacgtcgggca
cagggtgcagacgacgccgatgatatcgttgttgtcggtgaagaagttgcggtggaagct
gatctttccgaagagctctatcaggagttgaaggctcgcgagcagactgttctcacggtt
agtgagtatggctacggcaagcgttcctcgtcttatgagttccgtgtttctggccgtggc
ggcaaaggtatccgtgcaaccgatacgtcgaagaccgacgaaatcggcaagctggtagcg
ctcttcccggtcgaggcaagcgatcagatcctgctggtttccgatggcggtcagctgatc
cgcgtgccggttggtggcattcgtatcgctggacgctcgaccaaaggtgtcacgatcttc
aatacggctgacggcgaaaaggtcgtctcggtcgagcgcatttcggaaaccgaaagcgat
gaagagaatggcgctgccgaggttgatgaaaccgcagctgagggtgatgcacctgcagct
ggtggcgaagaataa
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