Ochrobactrum sp. BTU1: KMS41_07505
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Entry
KMS41_07505 CDS
T09943
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KMS41_07505 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_07505 (uvrB)
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KMS41_07505 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KMS41_07505 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Microtub_bd
DUF87
Kinesin
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QWK76957
LinkDB
All DBs
Position
1:1550917..1553718
Genome browser
AA seq
933 aa
AA seq
DB search
MASSKDKYTQDSHDETRGFGEAPQSGFSGAPLSGSISDWAKEIGDEAEKPQPKAKSPKAA
KTPKKVPERSKEATRSARGTSMGGAASAKERAAAGLNPVAGLDISLEDATALNPSGATAT
VKALSDLIESGNPLFKNGELWTPHRPARPAKSEGGIAIEMESSFEPSGDQPTAIRDLISG
LNDEDRTQVLLGVTGSGKTFTMAKVIQETQRPALILAPNKTLAAQLYGEFKNFFPNNAVE
YFVSYYDYYQPEAYVARSDTYIEKESTVNEQIDRMRHAATRALIERDDVIIVASVSCIYG
IGSVETYTAMTFEMKIGDRLDQRQLLADLVAQQYKRQDINFVRGSFRVRGDTIEIFPAHL
EDRAWRISLFGDEIETIAEFDPLTAQKTGDLQSVKIYANSHYVTPRPTLNQAIKSIQEEL
QHRLAELTRAGRLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRQPGEPPPTLFE
YIPDNALVFLDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRP
QTIAVSATPGKWEMEEAGGVFAEQVIRPTGLIDPPVEVRPAKSQVDDVLGEIRETARKGY
RTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLR
EGLDIPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADNITGSMQRAMDE
TSRRREKQEAYNLEHGITPASVKKNISDILNSVYEQDHVRADISGFAEEGSMMGNNLAAH
LEHLEKQMRDAAADLDFEKAARLRDEVKRLREMELAIADDPMAREVELESPVTGRTKGRH
NAGRKVHRTVDDEPKKSLFAKPSLDNMGPGTDMAKPLFRKNTLDEMTVKRTEKPAGADEA
LLRRERSGIGSYEDPAETARKKRRPGKTGRPGR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcaaaagacaaatacactcaggattcgcatgatgaaactcgcggctttggc
gaagcgcctcagtccggtttctcaggtgcgccgctttcaggttcaatttccgactgggcg
aaagagataggggatgaggctgaaaaacctcaacctaaagccaaatcacccaaagcggcg
aagacaccgaaaaaggtgcctgaacgcagcaaagaagcgacgcgcagcgcgcgcggtaca
tccatgggcggcgcggcctccgctaaggaacgcgcagccgcgggtcttaatcccgtggcg
ggccttgatataagcctcgaagacgccacggctcttaatccttcaggcgccacggctacc
gtcaaagcgctgtctgatctgattgaatccggcaatccgctgttcaagaatggtgagctt
tggacaccgcaccgccctgcccgtccggccaaatccgaaggcgggattgcgattgagatg
gaatcgagcttcgagccatctggcgaccagccgacagcgatccgcgacctgatcagtggc
ttgaacgacgaagatcggacacaggttttgctcggcgtcaccggctccggtaagaccttc
acaatggcgaaggtcattcaggaaacgcagcgtccggcgcttattcttgcgccgaataag
acgcttgcggcgcagctttacggcgaattcaaaaacttcttcccgaacaatgccgtcgaa
tatttcgtttcctattacgattactatcagcccgaagcctatgtggcgcggtcggacacc
tatatcgaaaaagaatcgaccgtaaacgaacagatcgaccggatgcgccacgcagcaacg
cgagcgctgatcgagcgcgatgacgtcatcatcgtggcatcagtttcgtgcatttacggt
atcggttcggtcgaaacctatacggccatgacgtttgagatgaagatcggcgaccggctc
gaccaacgccagcttctcgccgatcttgtggcacagcagtataagcggcaggacatcaac
ttcgtccgcggctcattccgcgtgcgtggcgatacaattgaaatcttcccggcccacttg
gaagaccgcgcatggcgtatctcgctgtttggcgacgagattgaaaccatcgccgagttt
gacccgttgaccgctcaaaagaccggcgatcttcagtcagtcaagatctatgcgaattcg
cactatgtgacaccacgcccaacgctcaatcaggctatcaagtccattcaggaagagctg
cagcatcgtcttgcggaactcacccgcgcaggtcgtctgctcgaagcgcagcgccttgaa
cagcgcacgaatttcgaccttgaaatgttagaggcaaccggcgtctgcaacggcatcgaa
aactattcgcgctatctcaccggacgccagccgggcgagccgccaccgaccctattcgag
tatatcccggacaatgctctggtcttcctcgacgaaagccacgtcactgttccacaaatt
ggtggcatgtatcgcggcgactttaggcgcaaagcaacattggccgaatatggtttccgc
ctgccatcctgcatggataaccgcccgctgcgcttcgaagaatgggacgccatgcgtccg
cagaccatcgcggtttcggcaacgcccggtaaatgggaaatggaagaagctggcggcgta
tttgccgaacaggtcatccgcccgaccggcctgatcgatccgccagtagaagtgcgtcct
gcgaaaagtcaggtagatgatgtgctgggcgaaatccgcgaaactgcgcgcaagggttat
cgtacgctctgcacggtgctgaccaagcgcatggcggaagacctgaccgagtatctccac
gaacagggtgttcgcgtgcgttatatgcactcggacatcgacacgctggaacgcatcgaa
atcattcgcgatctgcgccttggcgctttcgacgtgctggtgggtatcaacctgctgcgc
gaaggtctcgatattcccgaatgcgggttcgtcgccattcttgatgctgacaaggaaggt
ttcctgcgttcggaaacgtctctggtgcagacgattggtcgtgcggcgcgtaacgttgac
ggcaaggtcattctttacgccgacaatatcaccggttctatgcagcgcgcgatggatgaa
accagccgccgccgcgaaaagcaggaagcctacaatcttgagcatggcatcacgcctgcc
tcggtgaagaagaatatatcggacattctgaactcggtttacgagcaggatcacgtccgc
gccgatatttcgggctttgccgaagaaggctcgatgatgggcaacaatcttgctgcccat
ctcgaacatcttgaaaagcagatgcgcgatgccgccgccgatctcgacttcgaaaaggca
gcgcgtctgcgtgatgaggtcaagcgtctgcgcgaaatggaactggcgattgccgacgat
ccaatggcgcgggaagtggaacttgaaagccctgtaactggccgtaccaagggccgtcac
aacgcgggccgtaaggttcaccgcacggtcgatgacgagccgaagaagtcgctttttgcc
aagccttcgctcgacaacatgggaccgggcacggacatggccaaaccgctgttccgcaag
aacacgctggatgaaatgactgtcaagcggacagaaaaaccggcaggtgcggatgaagct
cttcttcgccgcgaacgttcaggcatcggctcttatgaagacccggctgaaaccgcccgc
aagaagcgtcgccccggcaagactggccgaccggggcggtaa
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