Ochrobactrum sp. BTU1: KMS41_08785
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Entry
KMS41_08785 CDS
T09943
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KMS41_08785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
occ03000
]
KMS41_08785
Transcription factors [BR:
occ03000
]
Prokaryotic type
Helix-turn-helix
IclR family
KMS41_08785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Dimerisation
MarR_2
B-block_TFIIIC
Motif
Other DBs
NCBI-ProteinID:
QWK77190
LinkDB
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Position
1:complement(1814961..1815761)
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AA seq
266 aa
AA seq
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MDKTVLDEESSLKLVPAVVRAAQILDCVAESREGIKLSDLVRQTSLPKSSVHGLCQTLAH
LKLLKLNSDGSFTMGAQSVRWANVFLASSDIVDAFHEAVAEAEELGAYTLTLSHLEGPEV
IYLSCRNSSAPLGITFRIGMRVPAVFTATGKAMLAAMSEQELARHLPSDWPTPITPSSVQ
SLKQLGSEIADVKKRGYSVDDGQLREGMFCIGASICDRPNHPSAGIALSMMAVEARSEIV
ETMGARVRALADNVAERMGWFSPPPR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaccgtactcgatgaagaaagttccttgaaactggttccggctgtggtcagg
gcagcgcaaattcttgattgcgttgccgagagccgcgaaggcatcaaactttccgatctc
gttcgccagaccagcctgcccaaaagcagtgttcacggtctttgccagactcttgcgcat
ttgaagttattgaagctcaatagcgatggaagctttacaatgggcgcgcagtcggttcgc
tgggccaatgtctttctggcaagcagcgatattgtggatgcgtttcatgaagcggtggca
gaagcggaagagcttggtgcatatacattgacgctttcccaccttgaaggcccagaagtc
atctatctgtcctgccgcaactcttctgcaccgcttggtatcacgttccgtattggtatg
cgcgtaccggctgtctttactgcgacgggtaaggcgatgttggcggcaatgtctgagcag
gagcttgctcgccacctaccttccgattggccgacgcctattacgccttcgagtgttcaa
tctttgaagcagcttggttctgaaatagcggacgtaaagaagaggggctattcggttgat
gatggccagttgcgcgaaggtatgttctgcataggcgcttcgatctgtgatcgacccaat
catccttcggctgggattgcgttatcgatgatggcggttgaggctcggtcggagattgtt
gagacgatgggcgcgcgggtgcgtgcattggcggataatgttgcggagcggatgggctgg
ttcagcccgccgccgcgctga
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