Ochrobactrum sp. BTU1: KMS41_10925
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Entry
KMS41_10925 CDS
T09943
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_10925 (addA)
Enzymes [BR:
occ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KMS41_10925 (addA)
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KMS41_10925 (addA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DEAD
Exo5
Motif
Other DBs
NCBI-ProteinID:
QWK77576
LinkDB
All DBs
Position
1:2261882..2265412
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AA seq
1176 aa
AA seq
DB search
MKKQRVIPKETIDAQASAANPLASVWVSANAGSGKTHVLTERVIRLLLEGTDPSKILCLT
YTKAAAAVMQNRVFARLSEWAMLPDEDLADRLVKLEGRRPGATRLAVARRLFARALETPG
GLKIQTIHAFCEAILHQFPLEANIAGHFEMMDDLMQVALVGEARRTLLETAHGGGDPELA
NAFADVMQAAGEMGLQALLDEAVGRRNGLQQYISALGNADERSETLHRHFRFRPDTRESD
LLDDMWPVPEFSDDALDLILSIQKGAARAHDFALQLKQYDKVKSSFDKEAVLRASFLKAT
GEAKSGSYVGSAAVKKLLPDFEEDFNAAAMRVELGLDKIKELRLIRLNLAGLTLIDNLLQ
RYHDLKRKRGLLDFEDLITRTVALLARDGAGQWVQYKLDRGIDHILVDEAQDTSPDQWQV
IRMLSEEFFSGLGQRNVQRTLFAVGDEKQSIYSFQGAVPEDFAAQGRAVSLRAQDAELKF
ERVSLNFSFRSAPDVLQAVDEVFARPEANRGLSGATVHSAIRDNEPGEVEIWDMLTPEEV
EEPDDWRVPVDHLQAPAIKLAEQIAATIRYWLDRGETIPGQNRKLAPKDIMVLVRKRDQF
MPALSRALKERHVPVAGADRLKLTSHIAIQDLMALGRFVLQPSDDLSLASLLKSPLFGWD
DDRLFALAHPRKSGETLFERLYHASLEDPALIGVHKTLSRWRNMADTMPIFEFYARILSA
DGARRKLLARLGPEAGDIIDEFQNYALSAERAGLPGMQAFLETLDAASPQIKRELDQGRN
EVRIMTVHAAKGLEGAVVFLVDPGNAVWSGTRAPKLIPFDLSNDGPQVKGYLWQPNAGYQ
TGFLASQIEGLKARAEEEYRRLLYVGMTRAEDKLIVCGYRGSRESGETWHRLVEDALTTK
AETFVHPVSGVAARRYRNTPRGLTEIAEPEVAKAAELPPLPLDYLKPIKPEPGLPRPLAP
SGASALIEADEEPPLDTLSPVLGQGGETSAFALRRGTAIHMLLQYLPEVTANEREKLAQD
YLARIAADWPEAERAKAWASVATILADPKFAPVFARGSRGEVAVMGTINLGGKDHAVSGQ
IDRISVDENRVLIVDYKTNRPPPQTVETVPFAYRAQLALYRELLAPLYPGRVVEVALLFT
EGPYLLPLPENVLNEALKALSDSQGKVSNQSLTNAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaacgtgtcattccaaaggaaacaatcgacgcgcaggccagtgccgccaat
ccgctggcctctgtctgggtgtcggcgaatgccggttcgggtaagactcacgttctgacc
gagcgcgttatccggctgctgctcgaaggcactgatccatcaaaaatcctttgcctgacc
tataccaaggcggcagccgccgtcatgcaaaaccgcgtctttgcgcgattgtccgaatgg
gcaatgttgccggatgaggatctggctgacaggcttgtcaagctcgaaggcaggcgcccg
ggagcgacacggcttgcggtggcacgcaggctttttgcgcgcgcgcttgaaacgccgggc
gggttgaaaatccagaccatccacgcattttgcgaagccatcctgcatcagttcccgctt
gaggcgaatattgcaggccacttcgagatgatggacgatcttatgcaggtggctcttgtc
ggcgaagcgcgacgcaccctgcttgagaccgcgcacggcggcggtgatccggaactggca
aacgcctttgccgatgtcatgcaggcagcgggcgagatgggtttgcaggcactgcttgat
gaggctgttggtcgccgcaatggcttgcagcaatacatttctgcgcttggtaatgcggat
gagcgcagcgagactttgcacaggcatttccgttttcggccagacacgcgcgaatccgat
ttgctggatgatatgtggccggtgccggaattttcagacgatgcactcgatctcattttg
tcgatccagaagggtgcggcacgcgcacatgattttgcgttgcagctcaagcaatatgac
aaggtcaaaagcagcttcgacaaggaagccgttctgcgcgcttccttcctgaaagccacc
ggcgaagcaaaatccggttcctatgtcggctcggctgcggtcaaaaagctgctgccggat
ttcgaggaagattttaatgccgcagcaatgcgtgttgaactcggtctcgacaagatcaag
gagttgcggcttatccggctaaatctggccgggctcacactcattgataatctcctgcag
cgctatcatgatttgaagcgcaagcgcggcctgctcgactttgaagacctgattacccgc
acggtggcgcttctggcgcgtgatggggcggggcaatgggtacagtataagcttgatcgt
ggcattgatcatattcttgtcgatgaagcacaggataccagccccgatcagtggcaggtc
atccgcatgttgtcggaagagtttttctcgggcctcggtcagcgtaatgtgcagcgtacg
ctgtttgccgttggcgatgaaaaacagtcgatctactcgtttcagggcgcagtgccggaa
gactttgctgcacagggcagggcggtcagcctccgggcacaggatgcagagcttaaattc
gagcgcgtaagcctcaatttctcgttccgttcggcccctgatgttttgcaggccgtggac
gaagtttttgctcgtcccgaggccaatcgcggcttgtcaggtgccactgttcactccgcc
attcgcgataatgagccgggcgaggtggaaatctgggatatgctgacgccggaagaggtg
gaggagcccgacgactggcgcgtgccggtcgatcatttgcaagctccagctatcaaactc
gccgaacagattgcagcaaccattcgctactggcttgaccgcggcgaaaccattccgggc
cagaaccgcaaacttgcgccgaaagatattatggtgctggttcgtaagcgcgatcagttc
atgccagcgctttcgcgcgcactcaaagagcgccatgtgccggtggctggtgccgaccgc
ctcaagcttacaagccacatcgccattcaggatctgatggcgctggggcgtttcgtgttg
cagccgtcagatgatttgtcattggcttcgcttctcaaaagcccgctgtttggctgggat
gatgacagactgtttgcgctcgcccatccgcgcaagagcggcgaaacgctgtttgagcgc
ctttatcatgcatcccttgaagacccggcactgatcggcgttcataagacgctgagccgt
tggcgcaatatggccgacaccatgccgatcttcgagttctatgcgcggattctcagcgca
gatggtgcaagacgtaagcttttggcgcggcttggaccggaagcaggcgatattatcgat
gaattccagaactatgcgctttcggctgaacgcgctggtctgccgggtatgcaggcattt
ctggaaacgcttgatgccgcctcgccgcagatcaagcgcgaacttgatcagggccgcaac
gaagtacgtatcatgacggttcatgccgccaaggggcttgagggtgctgtggtgtttctg
gttgatccgggtaatgccgtctggagcggaacacgcgcgcccaagctgatcccgtttgat
ctcagcaatgacgggccacaggtcaaaggctatctctggcagcccaacgctggctatcag
accggctttttggcgtcacagattgaaggcttgaaggctcgtgcggaagaagaatatcgc
cgcctgctctatgtaggcatgacgcgtgctgaagataagttgattgtctgtggctatcgt
ggttcgcgtgaaagcggcgagacatggcacaggctggttgaagatgcgctcacaaccaag
gctgagacctttgtgcatccggtatcgggtgttgccgcccggcgctatcgcaacacgccg
cgcggtctcactgagattgcagagcctgaagtggcgaaagcagcagagctgccaccgctg
ccgctcgactatctcaagcccataaagccggaaccggggttgccgcgtccgctggcgcca
tcgggtgcatcagcactgattgaagcggatgaggagccaccgcttgatacgctgtcgccg
gttctgggacagggcggcgagacgtctgcatttgctcttcgtcgcggtacggcgatccat
atgctgttgcaatatctgccagaagtgaccgcgaatgagcgcgagaagcttgcacaggat
tatctggcacgcattgctgccgactggccggaagctgaacgcgcgaaagcctgggcgagt
gttgcaacaattctggccgatccaaagtttgcgccggtttttgctcgcggatcgcgtggt
gaagtggcggtcatgggcacgatcaatctcggcggaaaagaccatgccgtctcgggtcag
atcgaccgcatcagcgttgatgaaaaccgcgtgctgattgtggattataaaaccaatcga
cctccaccacagaccgttgaaactgtgccttttgcctatcgcgcacagctggcgctttat
cgggaattgcttgcgcctctttatccgggaagggttgttgaagtggctttgctcttcacg
gaaggcccgtatttgctgccattgccggaaaacgtgctcaatgaagcattgaaggctctc
agtgactctcaaggaaaggtgagcaaccagagcttgacgaatgcgggctga
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