Ochrobactrum sp. BTU1: KMS41_11365
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Entry
KMS41_11365 CDS
T09943
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
occ03016
]
KMS41_11365 (truB)
Enzymes [BR:
occ01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KMS41_11365 (truB)
Transfer RNA biogenesis [BR:
occ03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KMS41_11365 (truB)
Prokaryotic type
KMS41_11365 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QWK77655
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All DBs
Position
1:2352855..2353844
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AA seq
329 aa
AA seq
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MARRGKKKGRPVSGWVIFDKPKGMGSTEAVSKIKWLFNAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVMDGTKVYRFTVTWGEERSTDDLEGVATKNSDNRPSRADVEALLPNYTGVI
SQIPPQFSAIKIAGERAYDLAREGETVEIPAREVEIDRLEIVEFPDANRTEFEVECSKGT
YVRSLARDMGRDLGCYGHISDLRRIEVAPFTDEDLVTLAELEEAWPPLPPKKEEGEADAE
IVEQPAARRDFSAMDALIIDTGAALDCLPQVALSDDQAQRVRLGNPVIIRGRDAPLEADE
ACVTSHGKLLAIGYIEHGQFKPKRVFTAG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgaggcaagaaaaaaggtcgtccggtttccggctgggtcatttttgacaag
ccgaagggcatgggatcgaccgaagcggtctcgaagatcaagtggttgttcaatgccgaa
aaggccggccatgccggtacgcttgatcctcttgcctcgggcatgttgcctattgctctg
ggtgaagccaccaaaaccgtaccttacgtcatggatggaaccaaggtttatcgtttcaca
gtgacatggggcgaggaacggtcgaccgacgatcttgaaggtgttgccaccaaaaactca
gataaccgcccatcgcgtgcggatgtcgaagcgctgctgcctaattatacaggcgttatc
tcgcagattccgccgcagttttcggctatcaagattgcaggcgaacgcgcctatgatctg
gcgcgtgaaggtgaaacggtagaaattccggcgcgtgaagtcgaaattgatcgcctcgaa
attgtcgagtttccggacgcaaatcgcaccgaattcgaagtcgaatgctccaagggcacc
tatgttcgctcgcttgcgcgcgatatgggccgtgatctcggctgctatggccatatttcg
gatttgcgtcgcatcgaagttgctcctttcaccgatgaagatctggtaactctggcagag
ctcgaagaagcgtggcctccgctgccgccgaaaaaggaagaaggcgaggccgatgccgag
attgttgagcagccagcagcacgtcgcgacttctcggcaatggatgccctgatcatcgat
accggtgccgcactagattgcctgccacaggttgccctgtctgacgatcaggcacagcgc
gttcgtctcggtaatcccgtgatcattcgtggccgcgatgcgccacttgaagcggatgag
gcttgcgtgacgtcgcatggcaaactgcttgccattggctacattgagcatggtcagttc
aagccaaagcgcgtgtttacagcgggctaa
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