Ochrobactrum sp. BTU1: KMS41_12630
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Entry
KMS41_12630 CDS
T09943
Name
(GenBank) autoinducer binding domain-containing protein
KO
K21697
LuxR family transcriptional regulator, quorum-sensing system regulator VjbR
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
occ03000
]
KMS41_12630
Transcription factors [BR:
occ03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
KMS41_12630
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Paralog
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GFIT
Motif
Pfam:
Autoind_bind
GerE
CXCL17
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QWK79775
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All DBs
Position
2:292423..293205
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AA seq
260 aa
AA seq
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MTLDLIHFPNFKKTFFGTSFQGDSLALLTRIRDEIGCRYIMHTYRGRVGDCTKTNSSDLT
VVMTFPSSWVTRYSTKNYFVVDPIFQEDAPYFRNDSGGIVRDLKLDADVCPDVAEMMQDA
EKHGLGNVFLAVSARNPKAASGCTLFCFDLGEGEPRDYFVSRMRPRLLSVSGIIHNKLCG
CDETKSAASLLTPREIDCLRWAANGKTDGEIAEILSIARWTVVTYLQNAKIKLNCSNRTS
AVATALSLGLIEMPEVAHLI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgacttaattcatttcccaaatttcaaaaagacattcttcggcacgtcgttt
cagggcgactctttggcacttctgacgcgtatccgagatgaaatcggatgtcgttacatt
atgcacacctatcgtgggcgagtaggggattgtacgaagacaaactcgtctgacctaact
gtggttatgacgtttccttcgagttgggtcacacggtactcgacaaaaaactattttgta
gttgatccgattttccaggaggatgctccttacttcagaaatgattccggcggcattgtg
cgggatctcaaattggacgcggatgtctgtccagatgtagcggagatgatgcaagatgcc
gagaagcacggactcggcaatgttttcctcgccgtttctgcacgcaatccgaaagcagca
tctggttgcacactattttgttttgatctgggcgagggagaaccgcgcgattatttcgtc
tccaggatgcgtccacgattgcttagcgtttccggcatcattcacaataagctctgcggg
tgtgacgaaacgaaatctgctgcatcacttttgaccccgcgtgagattgactgtctgcga
tgggctgcaaatggcaaaaccgatggtgagatcgcggaaattctcagcattgctcgttgg
accgttgtgacctatcttcaaaatgcgaagatcaagctcaactgttcaaaccggacgtct
gctgtggcgaccgccctttcgctgggccttattgagatgcccgaagtggcgcatctgatt
taa
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