Ochrobactrum sp. BTU1: KMS41_14280
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Entry
KMS41_14280 CDS
T09943
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03030
DNA replication
occ03430
Mismatch repair
occ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KMS41_14280
03430 Mismatch repair
KMS41_14280
03440 Homologous recombination
KMS41_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
occ03032
]
KMS41_14280
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_14280
Enzymes [BR:
occ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KMS41_14280
DNA replication proteins [BR:
occ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KMS41_14280
DNA repair and recombination proteins [BR:
occ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KMS41_14280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QWK80072
LinkDB
All DBs
Position
2:complement(636671..637666)
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AA seq
331 aa
AA seq
DB search
MRHQFDLFVPSAEGDFKQAELRPARTKLAKATGPDEAEMVQRLKDSGRYRILQRLDPSPT
VPDADTVAFPRLGVVVDTETTGLSAAQEEIIEIGAVAFRYADDGSIGDVCATFGALQEPS
KPIPADITRITGITDEMVAGQIIPRAKLEALIGNADLIIAHNAGFDRPFLERFSPVFGNK
PWACSVKEIDWTARGFEGTKLGYLIGQSGYFHNGHRAEDDCQALLAVLKEQSGKTTPFAE
LLKASQKSRLRIYAENSPFEMKDKLKERRYRWSDGSDGRPKSWWTEIDEDELEAELEYLR
TEIYPWRDAEPLIQKLTAVDRYKERAPFGSK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccagttcgacctctttgtcccttctgccgaaggcgactttaagcaggcagaa
ctgcgccctgcccgcaccaaactcgcaaaggcgaccggccctgacgaagcggaaatggtt
caacgcctgaaagacagcgggcgctatcgtatcttgcagcggcttgacccatcgccgaca
gtacccgatgcggacacggttgcgtttcctcggctcggggttgtggttgacaccgaaacg
acgggattgagtgctgcgcaggaagaaatcatcgagattggtgctgtggctttccgctat
gcggatgatggctcaatcggtgatgtttgtgcaacttttggcgctttgcaagaaccttca
aagccaattccagccgatattacgcgtatcaccggcattaccgatgagatggtcgccggg
cagatcattccgcgtgcgaagcttgaagcgctgataggtaatgcggatctcatcattgcg
cataatgcaggttttgatcgaccctttctggaacgtttttcaccagtctttggaaacaag
ccctgggcttgttcggtcaaggagattgactggacggcacgcggctttgaaggcaccaaa
cttggttatctgatcggccagagcggctatttccataatggccatcgtgcagaagacgac
tgtcaggcgttgctcgccgtgctgaaggaacaatccggcaagacgacaccatttgcagaa
ttgctgaaggccagccagaaatcgcgcctgcgcatttatgcagaaaacagcccttttgaa
atgaaggacaagctgaaagaacgccgctaccgctggtctgatggcagcgacgggcgcccg
aaatcctggtggacggaaatcgacgaagatgaacttgaagccgaactcgaatatctgcgc
acagagatttatccttggcgtgatgcggagccgctgattcagaaactcactgccgtcgat
cgctataaagagcgagcgccattcggatcaaaataa
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