KEGG   Ochrobactrum sp. BTU1: KMS41_16250
Entry
KMS41_16250       CDS       T09943                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
occ  Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:occ00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:occ03400]
    KMS41_16250
Enzymes [BR:occ01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KMS41_16250
    5.6.2.6  RNA 3'-5' helicase
     KMS41_16250
DNA repair and recombination proteins [BR:occ03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KMS41_16250
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII PSD4
Other DBs
NCBI-ProteinID: QWK79057
LinkDB
Position
2:complement(1075674..1078226)
AA seq 850 aa
MTLNLTPTLETAAFHLPDRFVKWFEGKGWSPRAHQLELLSRAEQGQSTLLIAPTGAGKTL
AGFLPALVDLERRGSKSLSGKVSTDLSSAIASKKQGVHTLYISPLKALAVDIHRNLTIPV
EEMRLDITIETRTGDTPAHKRQRQKLVPPDILLTTPEQLALLIAYKGAEQFFKGLRYVVL
DELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAQPDELRRWLVEQDGTDPQSGL
VTVDGGAKPEITILESEQRVPWAGHSSRYAIPDIYAAIRAHRTTLLFVNTRSQAEMLFQE
LWRVNEDTLPIALHHGSLDASQRRKVEHAMAANTLRAVVATSTLDLGIDWGDVDLVIHVG
APKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECRAALDANYLGAQDTPTLIDGAL
DVLAQHVLGMACAEPFSADALYREVQSAAPYANLTRNTFDKILDFVATGGYALKTYERFA
KIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRSGKGANARGGRVLGRIEEYF
LETLTPGDTFLFAGKVLRFEGIRENECMASNAAGQDAKIPIYAGGKFPLSTYLASQVRAM
LADRTRWQFLPEQVREWLDVQAVKSVLPRTDELLIETFPKGGRFYMVAYPFEGRLAHQTL
GMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMGAMISPGRLSLTRLFDEDMLGDDLEAW
LDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRTHEPDHILLQATR
ADAATGLLDIKRLGDMLARVKGHLLHKPLARISPLALPVMLEIGRERVAGEGDDMLLEEA
ADDLIREAIG
NT seq 2553 nt   +upstreamnt  +downstreamnt
gtgactctgaacctgacacccactctcgagactgccgcctttcatttgccagaccgtttt
gtaaaatggtttgaaggtaagggatggtcgccgcgcgcccatcagctggagttgctatcg
cgcgccgaacagggacagtccacgctgctgattgcgcccactggtgctggtaaaacgctg
gcaggctttctgcctgcgttggtcgatctggagcgaagaggaagtaaatcactttcagga
aaagtgagcaccgatctttcatccgcgattgcgtctaaaaaacaaggtgtgcacacgctc
tatatttcgccgctgaaggcacttgcggttgatattcatcgcaatttgactattccggtc
gaggaaatgaggctcgacattacgattgagaccaggactggcgacacacctgcacataag
cgccagcgccagaagctagtcccgcctgacattcttctgacaacgcctgaacagctcgcg
ctgctcattgcctacaaaggggccgagcagtttttcaaaggtctgcgttatgtggtgctt
gatgagctgcactcgctggtcatttccaaacgcggccatttgcttgcgctcgggcttgca
cgtttgcgccgtctgcaaccgcaactgcaaacaattggactttctgcaactgttgcacag
ccagatgagttgcgtcgctggctcgtcgaacaggatggtaccgatccacagtctggtctt
gtcacagttgatggcggtgccaagcctgaaattacgattttagaatctgagcagcgggtt
ccctgggccgggcattcttcgcgctacgctatcccggacatttatgcggctatccgtgcc
caccgcacgacgctgctgttcgtcaatacccgaagccaagccgaaatgctctttcaagaa
ctttggcgtgtcaacgaagatacattgccaattgcgctgcatcacggctcgcttgacgcc
agtcagcgccgcaaggtggaacatgcaatggctgccaatacgttgcgggcggtcgtcgca
acctcgacacttgatcttggtatcgactggggggacgtggatcttgtcattcatgttgga
gcgccaaagggagcaagccgtcttgctcaacgcattggtcgtgccaaccatcgtatggat
gagccaagccgcgctattcttgtgcctgccaatcgttttgaagtgatggagtgccgcgct
gcgctcgacgccaattatctcggtgcgcaggatacgccaacgctgattgatggagcgctg
gatgttctcgcgcagcatgtgctgggaatggcctgtgctgagccttttagcgctgatgcg
ctctacagggaagtgcagagtgcggcgccttatgcaaaccttacacgcaatacgtttgat
aaaatcctcgatttcgttgcgactggtggctatgcgctcaaaacctatgaacgctttgcc
aagatccgcaagactgtcgatggtacgtggcgggtttcaaatccccgtatcgctcagcag
tatcgcctgaacattggcacgatcgtcgaagcgcctgaattgaatgtccggctcacccgt
agcggcaaaggagccaatgcgagaggtggtcgcgttctcggacgcatcgaggaatacttc
cttgaaacgctgacgcctggagacacatttttgtttgcaggtaaggtgttgcggtttgaa
ggcattcgcgagaacgaatgtatggcttccaatgctgcgggacaggatgcaaaaatcccc
atctatgccggtgggaaattcccgctttccacttatctggcgtcgcaggtgcgcgcgatg
ttggcggatcgtacacgctggcagtttctgccagaacaggtgcgtgaatggctggacgtg
caagcggtcaagtccgttttaccccgaacagacgagttgttgattgaaacgttccctaaa
ggcggtcgattttatatggtcgcctatccttttgagggcagacttgcccatcagacactc
ggtatgttgctaacccgtcgtctcgaacgcatgggcgcgcatccgcttggttttgttgcc
accgactactcgttggggctttggggtctcaaagacatgggagcgatgataagccccggc
agattaagtctgacgcggctttttgatgaagatatgcttggcgatgatctcgaggcatgg
cttgatgaaagctatcttttgaagcgtaccttccgcaattgtgccgtgatctcggggcta
attgaacgtcgacatccggggcaggagaaaaccggtcgccaggttacggtttcgactgat
ctcatttatgacgtcctgaggacccatgagccggaccacattttgctacaggcgacacgc
gctgatgctgcgaccggacttttggacatcaagcgtcttggggacatgctggcgcgtgta
aaagggcatttgctgcataagccgttggcgcgtatttctcccctggcattgcctgtcatg
cttgaaattggtcgcgaacgtgtggcaggtgagggtgacgatatgctgcttgaagaagca
gccgacgatctgatcagagaagcgataggatga

DBGET integrated database retrieval system