Ochrobactrum sp. BTU1: KMS41_17195
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Entry
KMS41_17195 CDS
T09943
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KMS41_17195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_17195
Enzymes [BR:
occ01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KMS41_17195
DNA repair and recombination proteins [BR:
occ03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KMS41_17195
Prokaryotic type
KMS41_17195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QWK80292
LinkDB
All DBs
Position
2:1255101..1255928
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AA seq
275 aa
AA seq
DB search
MEEFLADWTSDLNAPWRSFLGNITLDFDGISPELELEIWEPIFPVRRGRHFPGMPEGTHC
LRAFDGISPEDVRCVVLGQDPYPEPGFATGRAFEAGNLAGWNELNKMFSKSIRAYTQLIV
AARTGDLSYAHSFADWPKTLEAIERGAVKLEQPSKIADRWVNEGALLLNASLTLTRFKVD
IDVHQSQGHLVLWRPLIVEALKLLAAREKPLVFLGFGDAAAQALKLAGIDETVGGNLRCV
LRDHPARADEVLTRPNPFILCNKFLEEMGSQPIAW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatttttggcagattggacttccgatctgaacgcgccctggcgttcttttctc
gggaacatcacgctcgattttgatggcatttctcccgaactagaactcgaaatctgggag
ccaatttttccagttcgtcgcggtaggcattttccaggcatgcctgaaggcacacattgc
cttcgcgcattcgatggcatctctccagaggatgttcgctgcgtggtgcttggacaggac
ccgtaccccgaaccgggctttgccacggggcgggcatttgaagcgggcaatctcgcgggc
tggaatgagctcaataagatgttctcaaagagcattcgtgcgtacacccaactgatcgtt
gcagctagaaccggggacttatcctacgcacatagttttgccgattggccaaaaacgtta
gaggcgattgaacgtggtgccgttaagctggaacagccttccaagattgctgatcgatgg
gtgaatgaaggcgcgctgcttctgaacgcgtcgctaacacttacgcgctttaaggtcgat
atagacgttcatcaatcgcagggccacctcgtgctctggcgaccgctgatcgttgaagcg
ctcaagttactcgccgcacgtgaaaagccgctcgtatttcttggttttggtgacgccgca
gcacaggcactcaaactcgccggcatcgacgagaccgttggcggcaatttgcgctgcgtt
ctgcgtgatcacccggcgcgagccgatgaagttctgacgcgtcccaatccattcattctt
tgcaacaaatttctagaggagatgggttctcaacccatcgcttggtaa
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