Ochrobactrum sp. BTU1: KMS41_22495
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Entry
KMS41_22495 CDS
T09943
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
occ
Ochrobactrum sp. BTU1
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
occ03000
]
KMS41_22495
Transcription factors [BR:
occ03000
]
Prokaryotic type
Helix-turn-helix
IclR family
KMS41_22495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
HTH_24
MarR
Dimerisation
HTH_Crp_2
HTH_20
HTH_36
TrmB
DUF4423
Rrf2
HTH_11
HTH_9
HTH_27
HTH_45
NirdL-like_HTH
LexA_DNA_bind
Fe_dep_repress
YdaS_toxin
PCI
FlaG
Motif
Other DBs
NCBI-ProteinID:
QWK80504
LinkDB
All DBs
Position
3:743594..744358
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AA seq
254 aa
AA seq
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MDKAFIKGLRLIETLAASEKPRGITELANELGLTKSNVHRLLATLIEHGYVRQIPPHSTY
ELTTKIWQLGGLVIKRLNFIEVAHPALAMLSELTGETIHLSVLEGTQVVYVDKIEGAHHV
RAHTSIGSRAPAWTVATGKSMLAQLPDSYLEQFRDQITPYTAASKKNFDELKADIDLIRQ
QGYASVPQGEWREGISACACAVLGASGELVGAIGISGPDTRLKRKQIKEYSVHVMEASRM
ITRALGGRIFPPNV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggataaagccttcatcaagggactacgactgatcgaaaccttagcagccagtgagaaa
cctcgcgggataacggaactcgccaatgagctgggactaacaaaaagcaatgtccaccgt
ctcttagcgacgctgatcgagcatggctacgttcgtcaaatcccaccccatagcacttat
gagttgacaacgaaaatctggcagctcggcggtcttgtcatcaaaagactgaactttatc
gaggtggcacacccagcgcttgcaatgctttccgaacttaccggtgaaacaattcacctc
tcagttctcgaaggaacgcaggtcgtgtatgtcgacaagatcgagggtgcacatcatgtc
agggcacataccagcattggttcgagggcgcctgcgtggacggtcgccacaggtaaatcg
atgcttgcacagttgccagattcctatctggaacagtttagggatcagattacaccctac
acagctgcgtcgaaaaagaattttgacgagttgaaagctgacatcgatctaatacgccag
cagggatacgcctcggtcccgcagggtgaatggcgagagggaatttcggcttgcgcttgc
gctgtactgggcgcctcaggtgagctagtcggtgcaatcggaatatccggaccggatact
cggcttaaacgtaaacagatcaaggaatattctgttcacgtgatggaagcatcccgaatg
attacacgggcgctaggtggaaggatctttccacctaatgtataa
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