Oceanicola sp. D3: FHY55_00135
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Entry
FHY55_00135 CDS
T06139
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocd03016
]
FHY55_00135 (truB)
Enzymes [BR:
ocd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FHY55_00135 (truB)
Transfer RNA biogenesis [BR:
ocd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FHY55_00135 (truB)
Prokaryotic type
FHY55_00135 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QDC07749
UniProt:
A0A5B8BTF2
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All DBs
Position
complement(24191..25093)
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AA seq
300 aa
AA seq
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MARRKGRDISGWIILDKPAGPTSTACVNKLRWALEAKKAGHAGTLDPAATGLLAVAFGEA
TKCVPYITDAEKCYDFTVRLGAATNTDDAEGEVVATAETRPSDDEIRAALGHFTGDIMQV
PPKFSAVKIDGERAYALARDGEDFEVQARPLWVESLELTARPDADTAELRMVCGKGGYVR
SIARDLGEALGCLGHVVTLRRSWSGPFDLENAVTLEQVEELARTPEIDALLVPLEAGLEE
LARVTVNEASANRIAHGNPAPVVASDAEFGEECWAAHQGRAVALGRYMGGEFHPARVLNR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtaagggacgcgacatttccggctggatcatcctcgacaagcccgccggg
ccgacgagcaccgcctgcgtaaacaaactgcgctgggcgcttgaggccaagaaggccggc
catgcgggcacgctcgacccggctgccaccgggctgctggccgtggccttcggcgaggcc
accaaatgcgtgccctacatcaccgatgccgaaaagtgctacgacttcaccgtgcgtctg
ggcgcggcgaccaacaccgatgacgccgaaggcgaggtggtcgccacagccgaaacccgc
ccctccgacgatgaaatccgggccgcgcttggccacttcaccggcgacatcatgcaggtg
ccgcccaagttttccgccgtcaagattgatggtgaacgggcctatgcgctggcccgcgac
ggcgaggatttcgaggtgcaggctcgcccgctctgggtcgagagcctcgagcttacggcc
cgccccgatgcagataccgccgagctgcggatggtgtgcggcaagggcggctacgtgcgc
tccatcgcccgcgatctgggcgaggcactgggctgcctcggccatgtcgtcacgctgcgc
cgcagctggtcggggcccttcgatcttgaaaacgccgtcacgctggagcaggtcgaagag
ttggcgcgaactccggagatcgacgcgctactggtgcctctagaagccgggctggaagag
ctggcgcgggtcactgtcaacgaggcctcagccaaccgcatcgcgcacggcaaccctgcg
cctgtcgtggcttcggatgcagaatttggcgaggaatgctgggctgcacaccaaggccgc
gccgtagccctaggccgctacatgggcggcgagtttcaccccgcgcgggttctgaaccgg
tga
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