Oceanicola sp. D3: FHY55_00965
Help
Entry
FHY55_00965 CDS
T06139
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocd03032
]
FHY55_00965
03036 Chromosome and associated proteins [BR:
ocd03036
]
FHY55_00965
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_00965
DNA replication proteins [BR:
ocd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FHY55_00965
Chromosome and associated proteins [BR:
ocd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FHY55_00965
DNA repair and recombination proteins [BR:
ocd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FHY55_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-HIG
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QDC07900
LinkDB
All DBs
Position
complement(185088..185378)
Genome browser
AA seq
96 aa
AA seq
DB search
MATKPMTKTALVAAIAEELDSDKKSAAAALEAITAIITKEVSAGGAVTLPGVGKIYCRER
PERMVRNPATGDQIKKEADKVVKMTIAKALKDSVNG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaccgatgaccaagactgccctggtcgctgcaatcgccgaagaactggac
agcgacaagaagtcggctgccgcggcgctggaagcgatcaccgcaatcatcaccaaagaa
gtgtctgccggcggtgccgtgacccttcccggtgttggcaaaatctactgccgcgagcgc
cccgagcgcatggtgcgcaaccccgccaccggcgaccagatcaagaaagaggccgacaag
gtggtgaagatgaccatcgccaaggctctgaaagacagcgtgaacggctaa
DBGET
integrated database retrieval system
