Oceanicola sp. D3: FHY55_01495
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Entry
FHY55_01495 CDS
T06139
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocd03016
]
FHY55_01495 (mnmE)
Transfer RNA biogenesis [BR:
ocd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FHY55_01495 (mnmE)
Prokaryotic type
Methyltransferases
FHY55_01495 (mnmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AAA_28
ABC_tran
HflX_C
GBP
AAA_25
AIG1
TniB
Roc
AAA_18
Ras
Motif
Other DBs
NCBI-ProteinID:
QDC07997
UniProt:
A0A5B8BLX9
LinkDB
All DBs
Position
complement(289532..290812)
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AA seq
426 aa
AA seq
DB search
MDTIVAQATAPGRAGVAVIRISGPDAKPALQHLAGRVPEARRATLMQLRGSAGLLDTALV
LVFEVGASFTGEDVVELQTHGSVAVTRAVLSELTTRPGLRLAEPGEFTRRALENDQLDLA
QVEGLADLIEAETEAQRQLAQATFTGALGARVEEWRSLLIRAAALLEAMIDFADEEVPED
TTTEVLGLIDTLVSQFESEALGVDAAERIREGFEVAIVGAPNVGKSTLLNRLAGREAAIT
SEVAGTTRDVIEVRMDIGGLAVTLLDTAGLRETEDRVEAIGVERAKARAASADLRIFLGP
PMGLSPSAQDILAHPKSDMSQPSGEALGLSGLTGDGIDELLSRVKAVLSERLPTQTTATH
ERHRAALQSASDALRASRIEVEAGPERAEIAAEELRTALRRIESLTGRIGVEDLLGEIFS
SFCIGK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggataccatcgtcgcccaagccaccgcgcccggccgcgcgggggtcgcggtgatccgt
atttccggaccggacgccaaacccgcattgcagcaccttgctggccgcgtgccagaggct
cggcgcgccacgctaatgcagctgcgcggctccgcagggcttctcgataccgcgctcgtt
ctggtcttcgaggttggtgcgagcttcactggcgaagatgtggttgagctgcaaacgcac
ggctcagtcgccgtcacccgcgctgttctttcagagctgacaacgcggcccggcctccgc
ctcgctgagcctggagaattcacccgtcgtgcgctcgagaacgatcaactcgatctggcg
caggtcgaaggccttgctgatctgatcgaggccgaaacagaagcccaacgccagctcgcg
caagcaaccttcaccggtgccctcggagcgcgggttgaagaatggcgctctcttctcatc
cgcgcagcagccttgcttgaggcaatgatcgacttcgccgatgaagaagtgccggaggac
accacaaccgaggtgctgggcctgatcgacacgctggtttcgcagttcgaaagcgaagcg
cttggcgtagatgcggcagaacggatccgggagggtttcgaggttgccattgtcggcgca
cctaatgtcggcaaatccaccctgctaaaccgccttgccgggcgcgaagccgccattacc
tctgaggtcgccggaacgacgcgcgatgtcatagaggtccgcatggatatcggtggcctc
gctgtgaccctgctggataccgctggcctccgcgaaaccgaagatcgggtagaagccatc
ggtgttgaacgggcaaaagcccgcgccgcctcagcagacttgcggatctttcttggccct
ccgatgggcctgtccccttccgctcaagatatccttgcacacccgaagtctgacatgagc
caaccatccggcgaagctcttggtctgtcaggcctgaccggcgacgggattgatgagctc
ttgtcacgcgtcaaggcagtgctttccgaacgcctcccaacgcaaaccaccgctacgcac
gagcgccaccgggcggctctgcagtccgcgagcgatgctttgcgggccagtcgaatcgag
gtagaagcggggccagagagggcggaaatcgcagccgaagagctacgcaccgccctgcgc
cggatcgaaagcctcactgggcgtatcggggttgaagacctgctgggcgagattttctcc
agcttctgtatcggcaagtag
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