Oceanicola sp. D3: FHY55_01600
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Entry
FHY55_01600 CDS
T06139
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_01600 (addB)
Enzymes [BR:
ocd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHY55_01600 (addB)
DNA repair and recombination proteins [BR:
ocd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FHY55_01600 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDC08018
UniProt:
A0A5B8BQ62
LinkDB
All DBs
Position
complement(309623..312613)
Genome browser
AA seq
996 aa
AA seq
DB search
MFEPSEKPRLFSTPIGVDFGAALLNGLETRLEGAPPEAWGRVTVFVNTTRMRRHLLDRFA
EGPARLMPKIRLVTDLASDTRLTGLDPALSSLRLRLQLRQAIARLIELQPDLAPPAAAFD
LATSLAALLDEMRDEGVDPENLANLDVGDHSAHWARSLKLISILSGEDSDAFRSQSALNR
DALAALLSHWSEQAPTDPVIVAGSTGSRGTTHHLMEAVARLPQGAVILPGVDAEMPSAIW
ETLLSSALREDRIPEEDHPQYRFAALLASLDLSPADMATWANTPPVAPARNRLVSLALRP
APVTDQWRRDGPELLPELSSATETVTLIEAPTPRQEAGAIALALREAAGQGKSAALVTPD
RTLARQVTAALERWAIVPDDSAGLPLHQSAPGRFLIETAALFGQPLELAPALSLLKHPLT
ASSPTVRGMHQLNTGRFELWARRNGVARLDSENLAGWIKEGEGAEEARAWAAWVSDLLLP
PATRPAQPVETRLADHIALAEALAAGPGQTGSGGLWLKEPGEAARAVLDELAEAAPYAGD
LENSHYSGLIRRILAEKDVREAPIAHPLISIWGTIEARTRVVDLCILAGLNEGTWPASLP
QDPWMNRAMRREAGMLLPERRVGLAAHDFQQAMGAAEVILSRSARSAEAETVPSRWLNRF
TNLLTGLGDPGQQALSAMRKRGQSLLATSAALAHHTEQALSPLPAPRPSPAPPVEARPRK
LFVTAVSTLIRDPYAIYARHVLRLRRAGSRSPEPDAALRGTVLHMVMERALRREFAFDGP
VEDTVAAFVALAEGVIAEHIPWPATRRLWLGKLAAVVPDLIRKEAQWQAQGKPVVIEKEG
FVPLQAVDFTVAAKPDRIDSLTSGACAVMDYKSGTKPPSEKEVEAFDKQLLIEAAIAEAG
GFPGLGQRRAERVGYIALGNPGNSREEPLETEEGVWRPDAMLQDLAALIRCYEDPAKGYT
ARRAPQHLRYSSDYDHLSRYGEWDDTTAPETIPVGR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagccatccgaaaagccccgcctcttctccacgcccattggtgtggatttcggc
gcagcgctgctgaacgggctggaaacccgccttgagggtgccccgccggaggcatggggg
cgggtgacggtgtttgtgaacaccacgcgcatgcgccgccatctgctggaccgtttcgcc
gaagggccggcccggctgatgccgaagattcggctggtgacagatcttgcctccgacact
cggctcaccggacttgatccggctctgtcgtcgcttcggctgcggctccagcttcggcaa
gccatcgcgcggctgatcgagcttcagccagacctagcccctcccgccgccgctttcgac
ctcgccaccagcctcgctgcactgctcgatgaaatgcgcgatgagggcgtggaccctgaa
aacctcgccaacctagacgtgggcgatcactcggcgcattgggcacgcagcctcaagctg
atttccatcctctccggtgaagacagcgacgcattccgcagccaatccgcgctgaacaga
gatgccctcgccgcgctgctctcccattggtctgagcaggcaccaaccgatcctgtaatc
gttgcgggctccaccggttctcgcggcacaacccaccacctgatggaggccgtcgcccgc
ctgccccaaggcgcggtgatccttccgggcgtcgatgcagaaatgccgagcgccatatgg
gagacgctgctttcatccgccctgcgcgaagatcgcataccggaagaggaccatccgcag
tatcgtttcgcggccctgctggcctcactcgacctaagcccggcagacatggcaacgtgg
gcaaatacaccgcccgttgcccccgcccgcaaccggctggtctccctcgccctccgcccc
gcacccgtcaccgaccagtggcggcgggacgggcctgagcttttgcctgaactctcaagc
gccaccgagacggtaaccctgatcgaagcaccgacaccgcgccaagaagccggggccatt
gcactggccctgcgtgaggcggcggggcaaggcaaatccgccgccctcgtcacaccggac
agaacgcttgcccggcaggtcaccgctgcgcttgagcgctgggcgattgtgccagacgat
tctgcgggcctgcctttgcaccaaagcgcgccggggcggttcttgatcgaaaccgccgcg
ctcttcgggcagccgctggagcttgcaccggcgctctcgctgctcaaacacccccttacc
gcctcaagcccgaccgtccgtggcatgcatcagctcaacaccgggcgctttgagctctgg
gcgcggcgcaatggcgtggcccggctggattctgaaaacctcgcaggttggataaaagag
ggcgagggggctgaggaagcgcgcgcttgggcggcctgggtctctgaccttctgctgccc
ccggcaacacgccccgcgcaacccgtcgaaacgcgccttgccgatcacattgcccttgcc
gaagcccttgccgccggccctgggcaaactggctctggtggtctctggctgaaggagccg
ggagaagccgcgcgcgccgtgcttgatgagctggcagaggctgcgccctatgcgggcgat
ttggaaaacagtcactattccggccttattcgccgcattctggcagaaaaggacgtgcgt
gaagccccaatcgcccacccgctcatctcgatctggggcacgatcgaagcgcgcacccgt
gtggtggatctgtgcatactcgccgggttaaacgagggcacatggcccgccagcctaccg
caagacccttggatgaaccgcgccatgcgccgcgaggccggaatgctgctgccggagcgg
cgtgttgggctggctgcgcatgattttcagcaggccatgggggcggcagaggttattctg
agccgcagcgcgcgcagcgccgaagccgaaactgtgccctcccgctggctgaaccgtttt
accaacctgctcaccggccttggtgatccgggtcagcaggccctttccgccatgcgcaag
cgcggccaaagcctgctcgccacctctgccgccttggcgcatcataccgagcaggcactc
tcgcccctgccagccccccggccctcgcccgcgccgcctgttgaggcacgcccgcgcaag
ctttttgtcaccgccgtctcaaccctcatccgcgacccctatgcaatttatgcccgccat
gtgctcaggctgcgtcgcgcaggttcccgttcgcccgagccggacgctgcgcttcgtggc
accgtccttcacatggtcatggagcgcgccctgaggcgcgaattcgccttcgacggccca
gttgaagataccgtcgccgccttcgtcgcgcttgctgaaggcgtcattgcagagcacatc
ccttggcccgcaacgcggcggctctggcttggcaagctggcggctgtggtgcccgacctg
atccggaaggaggcccagtggcaggcgcagggcaagccggtggtaatcgaaaaagagggc
ttcgtgcccctgcaagcggtcgatttcaccgtcgcagcaaagcctgaccggattgatagc
ctcacctccggcgcgtgcgccgttatggattacaaatccggcaccaagccgccctccgaa
aaagaggtggaggcgttcgacaaacaacttctgatcgaggcggccatcgcagaggcgggc
gggttccccgggcttggtcagagaagggcagagcgggtgggttacatcgcgctgggcaac
cccggcaactcacgcgaagagcccctcgaaactgaagagggcgtctggagacccgatgcc
atgttgcaggatctcgcggcgctgatccggtgctacgaagatcccgcgaaaggctacacc
gcccgccgtgcaccccaacacctgcgctactccagcgactatgaccacctctcccgctac
ggcgaatgggacgataccaccgcgccagaaaccattccggtaggcagatga
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