Oceanicola sp. D3: FHY55_01820
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Entry
FHY55_01820 CDS
T06139
Name
(GenBank) dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
ocd
Oceanicola sp. D3
Pathway
ocd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FHY55_01820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocd02000
]
FHY55_01820
Transporters [BR:
ocd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FHY55_01820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
oligo_HPY
AAA_21
OppC_N
AAA_16
DUF7550
Motif
Other DBs
NCBI-ProteinID:
QDC08055
UniProt:
A0A5B8BQW6
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Position
complement(357004..358887)
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AA seq
627 aa
AA seq
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MTAFLKLLFRNRLAAMGAVVLSVILLLALAVPILPLADPNITNTADRFARPFSEGYLLGA
DHLGRDQLSRLLYGTRTSLMVGAVAAFLAAFFGSTIGILSGYFGGRTDNILMRLIDMLMA
FPYILLALAIVAALGTGLINALIAVAAVNIPFFARNIRGITVGLSHREFVDAARLAGKGH
VRIILTEVLPNVLPVIVIAMSTTVGWMILETAGLSFLGLGSQPPDSDLGSMLGQARAAFT
THPHTSIIPGVMIFLIVMSVNLLGDGVRDALDPRLRSGALSRPLPVTNVAKDRNVPAEDT
SANAALLDIQELETQFHVGDRIYEAVGKVSLSVKPGECLGIIGESGSGKSVTALSVTGLV
ASPPGVITGGAVRLEGKDLLSANYEQLRSVRGNRIAYIFQDPLSTLHPLYTVGDQLAEAI
RVHDSRVSKSAARARALELMKQVRIPNPESRLGNYPHELSGGMRQRVGIAMSLANEPDII
IADEPTTALDVTVQAQILSLLNDLRRERGLAIIFITHDFGVVAQLCDRVAVMYAGRIVED
GPTQSVLDAPAHPYTKRLIACVPELGGGRRELAAIPGLPPVVDDLPPGCHFAPRCHKATA
ACQVGYIGLEGDDARTVRCIHPEENVA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttcctcaagctcctcttccgcaaccgtctcgccgccatgggcgccgtcgtg
ctctccgtcatcctcctgctcgccctcgccgtacccatcctgccgctggccgaccccaac
atcaccaacaccgccgaccgtttcgcccgccccttctctgaaggctacctgctcggcgcc
gatcacctcgggcgcgaccagctctcccgcctcctctacggcacccgaacctcgctgatg
gtcggcgccgttgccgccttcctcgccgccttcttcggctccaccatcggcatcctctcg
ggctacttcggcgggcgaacagacaacatcctcatgcgcctgatcgacatgctgatggcc
ttcccctacatccttctggcgctcgccatcgtcgccgcgctgggcaccggcctcatcaac
gcgctcatcgccgtggctgccgtcaacatccccttcttcgcccgcaacatccgcggcatc
accgtcggcctctcgcaccgcgagtttgtcgatgcggcgcggctcgcgggcaagggccat
gtgcgcatcatcctcaccgaagtgctgcccaacgtgctgccggtcatcgtcatcgccatg
tccaccaccgtcggctggatgatcctcgaaactgcaggcctctccttcctcggcctcggc
tcccagccgcccgactccgaccttggctccatgctcggccaggcccgcgccgccttcacc
acccatccgcacacctcgatcatccccggcgtgatgatcttcctgatcgtcatgtcggtg
aacctgctgggcgatggcgtgcgcgatgcgctcgacccgcgcctgcgctccggcgccctt
tcgcgccctctgccggtgaccaatgtcgcaaaagatcgcaacgttccggcagaagacacc
agcgccaacgccgccctgctcgatattcaggagctggaaacccaattccacgtgggcgac
cgtatctatgaggcggtcggcaaggtctccctctcggtcaaacccggcgaatgtctcggc
atcatcggcgaatccggctccggcaaatcggtcactgccctctccgtcaccggcctcgtc
gcctcgccccccggtgtcatcaccggcggcgcggtgcggctggagggcaaagacctgctc
tccgccaattacgagcaactccgctcggtgcgcgggaaccgcatcgcctatatctttcaa
gacccgctcagcaccctgcacccactctacaccgtgggcgatcaactggccgaggcgatc
cgcgtgcatgacagccgggtgagcaaatccgccgcccgcgcccgtgcactcgaactgatg
aaacaggtccgcatccccaaccccgagtcccgcctcggcaactacccgcacgaactgtcg
ggcgggatgcgccagcgcgtcggcatcgccatgtcgctggcgaatgaacccgacatcatc
atcgccgacgagccaacaaccgcgctggatgtcactgttcaggcccaaatcctttcgctg
ctgaacgacctgcgccgcgagcgcgggctggcgatcatcttcatcacccacgatttcggc
gtggttgcccaactctgtgacagggtcgcggtcatgtacgcgggccggatcgttgaagat
gggccaacccaatccgtgctcgacgcccccgcccacccctacaccaagcgcctcatcgcc
tgcgtccccgagctgggcggcgggcggcgcgagctggccgccatccccggcctgccccct
gtggtggatgacctgccgcccggctgccacttcgctccgcgctgccacaaggccaccgcc
gcgtgtcaggtcggatacatcgggcttgagggcgacgatgcccgcaccgtgcgctgcatc
caccccgaggagaacgtcgcatga
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