KEGG   Oceanicola sp. D3: FHY55_01920
Entry
FHY55_01920       CDS       T06139                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
ocd  Oceanicola sp. D3
Pathway
ocd00521  Streptomycin biosynthesis
ocd00523  Polyketide sugar unit biosynthesis
ocd00525  Acarbose and validamycin biosynthesis
ocd00541  Biosynthesis of various nucleotide sugars
ocd01100  Metabolic pathways
ocd01110  Biosynthesis of secondary metabolites
ocd01250  Biosynthesis of nucleotide sugars
Module
ocd_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:ocd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    FHY55_01920 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    FHY55_01920 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    FHY55_01920 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    FHY55_01920 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    FHY55_01920 (rfbB)
Enzymes [BR:ocd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     FHY55_01920 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short adh_short_C2 Glyco_transf_4 Sacchrp_dh_NADP NmrA
Other DBs
NCBI-ProteinID: QDC08075
LinkDB
Position
377973..379010
AA seq 345 aa
MKLLVTGGAGFIGSAVVRRAIRQGHEVVNLDALTYAACLENVASVANHPGYRFEHADIRD
RPALDAILARHKPDAIMHLAAESHVDRSIDGPATFIETNVLGTFHLLEAARAYWQESGRP
ETFRFHHVSTDEVFGSLGAEGQFTETTPYDPRSPYSASKASSDHLVRAWHETYGLPVVMT
NCSNNYGPFHFPEKLVPVVILNALEGQPIPVYGRGENVRDWLYVEDHADALLTVIERGVL
GRSYNIGGENEARNIDLVRMICAILDEARPAQRPREELIAFVADRPGHDLRYAIDPSRIA
TELGWRPSVTLREGLEKTVAWYLANEAWWQALRDRDGVGKRLGTG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaagctgctggtgacaggaggcgcgggctttattggctcggcggttgtgcggcgcgcc
atccggcagggccatgaggtggtgaacctcgatgccctgacctatgccgcctgcctcgaa
aacgtggccagcgtggcaaaccatccgggctatcgcttcgagcatgccgatatccgcgac
cggcccgcgctggatgcgattttggcccggcacaagccggatgcgatcatgcatctggcc
gccgagagccatgtggacaggtcgatcgacggccccgcgacctttatcgaaaccaatgtg
ctcggcacctttcacctgctggaagcggcccgcgcctattggcaggagtccgggcggcca
gagacgtttcggtttcatcacgtgagcaccgatgaggtgtttggctcgctgggcgcggaa
ggccagtttaccgaaaccacgccctacgacccgcgcagcccctattcggcctcgaaggcc
agctccgaccatctggtgcgggcttggcacgagacctatggcttgccggtggtgatgacc
aattgttccaacaattacgggcctttccacttccccgaaaaactggtgccggtggtgatc
ctgaacgccttggagggccagccgattccggtgtacgggcggggcgaaaacgtgcgggac
tggctctatgtggaggaccacgccgatgcgctgctgacggttatcgagcgcggcgtgctg
ggccgaagctacaacatcggcggtgaaaacgaggcgcgcaacatcgaccttgtgcggatg
atctgcgccattctcgacgaagcccgcccggcacagcggccccgcgaggagctcatcgcc
tttgtggcagaccggcccggccatgacctgcgctacgccatcgacccgagccgcattgcc
acagaactcggctggcggccctcggtgacccttcgcgaagggttggagaaaaccgtggct
tggtatctggcaaatgaagcctggtggcaggcgctccgcgaccgggacggtgtgggcaag
cggctgggaaccggatga

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