Oceanicola sp. D3: FHY55_02080
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Entry
FHY55_02080 CDS
T06139
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FHY55_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_02080
Enzymes [BR:
ocd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
FHY55_02080
DNA repair and recombination proteins [BR:
ocd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FHY55_02080
Prokaryotic type
FHY55_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QDC11478
UniProt:
A0A5B8C0N7
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All DBs
Position
413325..414353
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AA seq
342 aa
AA seq
DB search
MSAALLEWYDAHARVLPWRVPPGSDARADPYGVWLSEVMLQQTTVAAVKDYFHTFTRLWP
TVDALAAARDEDVMARWAGLGYYARARNLLKCARVVAERGGFPESAEGLRELPGIGPYTA
AAVAAIAFDRPEVVVDGNVERVMARLHAVQEPLPAAKPVLTAHAAALTPKRRPGDYAQAV
MDLGATICTPKSPACGICPWREPCAARVEGIAAELPKKTPKKPKPVRLGHAYVIRRADGA
FLLERRPKRGLLGGMLGWPGAEWREEPAAAAPPVEAALHEIGEVRHTFTHFHLILRVHAG
RAEVEAPEGLHWERLSPAALPTVMRKAYDLAATSAALDVAGD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcgctgctggaatggtatgacgcccacgcccgcgtgttgccgtggcgcgtg
ccccccggcagcgacgcgcgggccgacccgtatggcgtgtggctttcggaggtgatgctg
cagcaaaccacggtggcggcggtgaaggattatttccacaccttcacccggctttggccc
acggtcgacgcactggcggcggcgagggacgaagacgtgatggcccgctgggccgggctt
ggctactacgcacgcgcgcgcaacctgttgaaatgcgcccgcgtggtggcagagcgcggg
ggctttcccgagtctgccgagggcctgcgcgaactgccgggcatcggcccctacacggcg
gcagcggttgcggcgattgcctttgaccggcccgaggtggtggtggatggcaatgtggag
cgggtgatggcgcggcttcatgccgtgcaggagcccttgcctgccgccaagccggtgctc
accgcccatgctgccgcgctgacgcccaagcgccggccgggggattacgcccaagcggtg
atggacctcggcgcaacgatctgcacccccaagagcccggcctgcggcatttgcccgtgg
cgggagccttgcgccgcaagggtggaggggattgcagccgagctgccgaagaagaccccg
aagaagcccaagccggtgcggcttggccatgcctatgtgatccgccgggcggatggtgcg
tttttgctggagcgccgccccaagcgcgggcttttgggtggaatgcttggctggccgggg
gcggaatggcgcgaagaacctgctgccgcagcgccgccggtggaggctgctctgcatgaa
atcggggaagtgcggcacacctttacccacttccatctgatcctgcgtgtgcatgccggg
cgtgccgaggtggaggccccggaggggctgcattgggaacggctttcgcccgccgccctg
cccacggtgatgcgcaaggcctatgatctcgccgcaacgtcagccgcgcttgatgtggca
ggcgattga
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