Oceanicola sp. D3: FHY55_02950
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Entry
FHY55_02950 CDS
T06139
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocd03021
]
FHY55_02950
Transcription machinery [BR:
ocd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FHY55_02950
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
IFR3_antag
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QDC08262
UniProt:
A0A5B8BMA2
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Position
560525..561403
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AA seq
292 aa
AA seq
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MPLDGDIDTSMSRHARQAELLDAETEQQLARAWRDHRDEQALHRLISAYMRLAISMAAKY
KRYGAPMNDLIQEASLGLMKAADKFDPERGVRFSTYAMWWIKASVQEFVMRNWSMVRTGS
TSSQKSLFFNMRRVQAQLEREAAAAGESLDSQQLRQKIAVEVGVPLADVEMMEGRLSGSD
FSLNVTQSSEDDGRQWIDALEDDGPQAAEQVEVEHDKAQLRDWLAEAMDALNDREQFIIR
ERRLAKEKRTLESLGEELGLSKERVRQLEAAAFQKMRRSLEQQSDEVLALIS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctttggacggcgatattgatacctccatgtcccgccacgcgcgtcaggcagaactg
cttgatgcagagactgaacagcaattggcccgcgcttggcgcgaccaccgcgacgagcag
gcgctgcaccgcctgatctcggcctacatgcgcctcgcgatctccatggccgcgaaatac
aagcgctacggtgccccgatgaatgacctcattcaggaggcatcgctgggcctgatgaaa
gctgccgacaagttcgaccccgaacgcggcgtgcgattctcgacctatgcgatgtggtgg
atcaaggcctccgtacaggaattcgtgatgcgcaactggtcgatggtgcgcaccggctcg
acctcttcgcagaagtcgctcttcttcaacatgcgccgtgtgcaggcgcagctggagcgg
gaggcggctgcggcgggcgaaagcctcgacagtcaacagctgcgtcagaagatcgccgtg
gaagtcggggtgccgctggctgatgtggagatgatggaaggcaggctctcgggctctgac
ttctcgctcaatgtcacccagtcctccgaggacgatggccgccagtggattgacgcgctg
gaagatgacggcccgcaggccgccgaacaggttgaggtggaacacgacaaggcccagctc
cgtgactggctggccgaggccatggacgcgctgaacgatcgtgagcagttcatcatccga
gagcgccgtttggccaaggagaagcgcacgcttgagagccttggggaggaactcgggctg
tccaaggagagggtgcgccagcttgaggcggcggccttccagaagatgcgccgctcgctg
gagcagcagtctgacgaagtgctggcgctgatctcctga
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