Oceanicola sp. D3: FHY55_03470
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Entry
FHY55_03470 CDS
T06139
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocd03036
]
FHY55_03470 (smc)
Chromosome and associated proteins [BR:
ocd03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FHY55_03470 (smc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QDC08358
LinkDB
All DBs
Position
complement(667618..671076)
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AA seq
1152 aa
AA seq
DB search
MRFTRLRLNGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLEALRWVMGENRPTAMRGGG
MEDVIFAGAASRPARNFAEVSIHIDNSERLAPAGFNDQDVLEVVRRITRDAGSAYKANTK
DVRARDIQMLFADASTGSHSPALVRQGQISELINAKPKARRRILEEAAGISGLYQRRHEA
ELKLNGAEQNLARVDDVIEQLAAQLAQLARQARQAARYREIGTELRQVEGLLLYRRWKEA
DEAVAAAGHAHRETVAAAGAAERAVLNAEKRRSETDAALPALREEEAIAAAVVQRLQVER
GGLREEAARAEATIDTLKNRLAQLTRDMEREEGLNRDAGETVERLGWEEAELQKAGEGHE
EKLEDATEAARKAAAVLSEIEERLAEQTEDVARLAARHQSAQRMQADARSATDRNEAEAA
KARRQADEARSRKASAEEAMRAAQAASAAATARAEEAEKALEAADTARAEIAGREAEARA
AASAAEGETKTLSAEMHALARLVDREGSEGGQVLDMLSVDKGYEKALGAALADDLRAPAV
AADAPSGWAALPDYPAPQGLPGGLHPLADYMHVPDVLRRRMGEVGLVATPEEGTARQAEL
KPGQRLVSREGDLWRWDGFRAAAEDAPSAAALRLEQINRLEELKLDLNEAEARADGARKA
HRALSEELARITEADRAARQARREADSAVADASRALSRAESDAAMAGTRAEASEMAVKRH
EDEATAARARLAEAEAALAQLGDLEEARGNVEAAKSLVENARQDMLSRRAVQDEVRRMGE
ARVRRLQEIAREVGNWRERLANAETRSSELGERKQATETELEAAEAAPEDIETRETKLQD
ALEKAEERRRAAADTLAEGEAAWREAQAEEREATKIAGELREGRAAAQARMEAAQEARKL
AEERIHEELECAPAELLENLKADPEKMPGVDALENDLSRLRRQRDALGAVNLRAEEDAKE
VQTEHDELVKEKADLEEAIRALRNGIAGLNKEGRERLLTAFEQVNSNFSLLFKHLFGGGE
ASLELVESDDPLEAGLEIMCMPPGKKLSTLSLLSGGEQTLTALALIFAVFLANPAPICVL
DEVDAPLDDANVTRFCDLLDEMTRRTDTRFLIITHHAVTMSRMDRLFGVTMQEQGVSQLV
SVDLKKAEALVA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttcacacggctcagactgaacggcttcaagagcttcgtcgacccgaccgatctg
gtcatcgccgacgggctgaccggcgttgtcgggccgaacggctgcggaaaatcgaacctg
cttgaggcattgcgctgggtgatgggcgaaaaccgccccaccgccatgcgcggcggcggc
atggaagatgtgatctttgccggggccgcctctcggccggcgcgcaactttgccgaggtc
tcgatccatatcgacaacagcgagcggctcgcacccgccgggtttaacgatcaggatgtg
cttgaagtcgttcgccgcatcacccgagatgccggctctgcctataaggccaacaccaag
gacgtgcgggcccgtgatattcagatgctctttgccgatgcctcgacaggctcgcacagc
ccggcgctggtgcgtcaggggcagatctcggagctgatcaacgccaagccaaaggcgcgg
cggcggatccttgaagaggccgccgggatctcggggctgtaccaacgccgccacgaggct
gagctgaagctgaacggcgctgagcaaaacttggcccgcgtcgatgacgtgattgaacag
cttgcggcccagctcgcgcaactcgcccgccaggcccggcaggctgcgcggtatcgggag
atcggcaccgagctgcggcaggttgagggcctactgctgtatcgccgctggaaggaggcc
gacgaggccgttgctgcggcgggccatgcccaccgagagactgtcgccgccgccggggca
gccgagcgcgccgtgctgaacgccgagaagcgccggagcgaaacggatgccgccctgccc
gcgctccgcgaggaggaggcgattgcggcggcggttgtgcaacggttgcaggttgagcgg
ggtggcttgcgtgaggaggccgcgcgggccgaggcgaccatcgacacgttgaagaaccgc
ctcgcccaactcacccgcgacatggagcgcgaggaagggctgaaccgcgatgcgggcgag
accgtggagcggctgggctgggaggaagccgagctgcagaaggcgggcgaaggccacgag
gaaaagcttgaggacgccaccgaggcggcccgaaaggcggcggccgttctgtcggagatc
gaggagcggctggccgagcagaccgaagatgtcgcccggctcgcggcccgccatcaatcc
gcgcaacggatgcaggccgatgcccgcagtgcgaccgaccgaaacgaggcggaggccgcg
aaggcacgccgtcaggccgatgaggcgcgcagtcggaaggccagcgccgaagaggccatg
cgcgccgcgcaagcggccagcgccgcggccaccgcgcgtgcggaggaggccgagaaggcg
ctggaggccgctgacaccgcccgcgccgagattgccggacgcgaggcggaggcccgcgcc
gccgcctctgccgccgagggtgagaccaagacgctcagcgccgaaatgcacgcgctcgcc
cgtctggttgaccgcgaagggagcgaaggcgggcaggtgctcgatatgctctcggtcgac
aaaggctacgaaaaggccctcggcgcggcacttgccgacgatctgcgggcgcctgccgtt
gccgccgatgctccctctggctgggccgccttgccggactatcccgcgccacagggcctg
cccggcgggctgcatccgctggccgattacatgcatgtgcccgatgtgttgcgccgccgc
atgggagaggtcgggctggttgcaacccccgaggaaggcactgcgcggcaggccgagctg
aaaccgggccagcggctggtgtcacgcgagggagatttgtggcgctgggacgggttccgt
gccgctgccgaagatgccccctccgctgctgcgctgcggcttgagcagatcaaccggctc
gaagaactgaagcttgatctcaacgaggccgaagcccgtgccgatggggcccgcaaagcg
cacagggcgctttctgaagagctggcccgcattaccgaagccgaccgcgccgcccgacag
gcccgccgcgaggcggattccgccgttgccgatgcctcccgcgcgctttctcgcgctgag
agcgatgctgcgatggctggcacccgcgccgaggcctccgagatggccgtgaagcggcac
gaggacgaggccacggcggcccgcgcacggctcgcggaagccgaggctgcactggcgcag
ctgggggatttggaggaggcccggggcaatgtcgaggcggccaagagcctcgtcgagaac
gcccgtcaggatatgctttcccgccgcgccgtgcaggacgaggttcggcgcatgggcgag
gcccgtgtgcgtcgcctgcaggagatcgcccgcgaggttggcaattggcgcgagcgactg
gccaatgccgagacccgctcgagcgagttgggtgaacgcaagcaggcgacggaaaccgag
ctggaggccgccgaggcggccccggaagacatcgaaacgcgcgaaaccaagctgcaagac
gcgctggaaaaggcggaagagcgccgccgtgccgccgctgacacgctagctgagggcgag
gctgcatggcgcgaggcgcaggccgaggagcgtgaggcgacaaagatcgccggtgaactg
cgcgaaggccgcgccgccgctcaggctcggatggaggccgcgcaggaagcccgcaagctg
gcggaagagcgcatccacgaagagctggaatgtgcgcccgctgagctgcttgagaacctc
aaggccgaccccgagaagatgcccggcgtcgacgcgctggaaaacgacctttctcgcctg
cgtcgccagcgcgatgcccttggcgcggtgaacctgcgcgccgaggaagatgctaaggaa
gtgcagaccgagcatgacgagttggtcaaggagaaggccgatctggaagaggccattcgc
gccctgcgcaatggcattgccgggctgaacaaggagggccgcgagcgcctgctgaccgcc
ttcgagcaggtcaactccaacttctcacttctgttcaagcacctcttcggcggcggtgag
gcctcgctggagctggtggaatcggacgaccctctggaagcggggctggagatcatgtgt
atgccgccgggcaagaagctctccacgctctcgctgctttccgggggcgagcaaaccttg
acagcgctggcgctcatcttcgcggtcttcctcgccaaccccgcgccgatctgtgtgctg
gacgaggtggatgcgccgctggacgatgccaacgtcacccgcttctgcgacctgctcgac
gagatgacgcggcgcactgacacacgcttcctcatcatcacccaccacgcggtgacgatg
agccggatggacaggctctttggcgtcaccatgcaggagcagggcgtgagccagctggtc
tcggttgacctcaagaaggcagaggcgctggtcgcctga
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